@COMMENT
LIGANDBOX_ID = D08901-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08901
NAME = Degarelix_(INN/USAN)
MOLECULAR_FORMULA = C82H103N18O16Cl
MOLECULAR_WEIGHT = 1632.289
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 19
NUM_OF_ACCEPTOR = 17
NUM_OF_CHIRAL_ATOMS = 11
TPSA = 512.8700
HOMO = -10.4058
LUMO = -3.4073
mLOGD = 1.821
mLOGPA = -8.411
mLOGS = -5.295
@MOLECULE
D08901-03
221 228 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -4.7119 1.5572 -0.1484 C.3 1 LGD 0.0704
2 C2 -3.2901 2.0763 -0.4374 C.2 1 LGD 0.6631
3 N1 -2.5916 2.7295 0.5698 N.am 1 LGD -0.6011
4 C3 -1.2833 3.3677 0.3410 C.3 1 LGD 0.0624
5 C4 -1.3955 4.4414 -0.7474 C.2 1 LGD 0.6482
6 N2 -2.3446 5.4378 -0.5820 N.am 1 LGD -0.5998
7 C5 -2.5301 6.5369 -1.5402 C.3 1 LGD 0.0545
8 C6 -3.7184 6.2062 -2.4589 C.2 1 LGD 0.6493
9 N3 -3.5981 5.0966 -3.2819 N.am 1 LGD -0.5947
10 C7 -4.6879 4.6135 -4.1462 C.3 1 LGD 0.0568
11 C8 -4.5495 3.0943 -4.3007 C.2 1 LGD 0.6786
12 N4 -3.4357 2.5952 -4.9614 N.am 1 LGD -0.5772
13 C9 -2.9203 1.2460 -4.6934 C.3 1 LGD 0.0609
14 C10 -1.4316 1.3096 -4.3132 C.2 1 LGD 0.6678
15 N5 -0.9742 0.3885 -3.3834 N.am 1 LGD -0.5840
16 C11 0.4071 0.3498 -2.8862 C.3 1 LGD 0.0665
17 C12 0.4081 0.1026 -1.3714 C.2 1 LGD 0.6829
18 N6 -0.3588 -0.9320 -0.8505 N.am 1 LGD -0.5604
19 C13 -0.1087 -1.4622 0.4996 C.3 1 LGD 0.0603
20 C14 1.1813 -2.2979 0.4798 C.2 1 LGD 0.6482
21 N7 1.9662 -2.3265 1.6210 N.am 1 LGD -0.5886
22 C15 3.3937 -2.6990 1.5870 C.3 1 LGD 0.0559
23 C16 3.6294 -4.0598 2.2827 C.2 1 LGD 0.6673
24 N8 -5.1631 0.6576 -1.2231 N.am 1 LGD -0.5957
25 O1 2.9423 -4.4095 3.2281 O.2 1 LGD -0.5608
26 O2 1.5547 -2.8861 -0.5200 O.2 1 LGD -0.5810
27 O3 1.0796 0.7910 -0.6212 O.2 1 LGD -0.6570
28 O4 -0.6719 2.1422 -4.7807 O.2 1 LGD -0.5995
29 O5 -5.3678 2.3256 -3.8232 O.2 1 LGD -0.5923
30 O6 -4.7441 6.8664 -2.4754 O.2 1 LGD -0.5855
31 O7 -0.6958 4.4197 -1.7458 O.2 1 LGD -0.5780
32 C17 4.2105 -1.5873 2.2932 C.3 1 LGD -0.0918
33 C18 4.2002 -0.2404 1.5222 C.3 1 LGD -0.0776
34 C19 4.4234 0.9611 2.4657 C.3 1 LGD -0.1103
35 C20 4.0895 2.2953 1.7736 C.3 1 LGD 0.0937
36 N9 3.7767 3.2912 2.8158 N.4 1 LGD -0.7432
37 O8 -2.7592 1.9215 -1.5227 O.2 1 LGD -0.6060
38 C21 -6.0704 -0.3682 -1.0127 C.2 1 LGD 0.6702
39 C22 -6.4732 -1.2305 -2.2038 C.3 1 LGD -0.1661
40 O9 -6.5301 -0.5595 0.0997 O.2 1 LGD -0.6036
41 C23 -1.3163 -2.2882 1.0173 C.3 1 LGD -0.0837
42 C24 1.1794 -0.7630 -3.6432 C.3 1 LGD -0.0440
43 C25 -3.1670 0.2807 -5.8798 C.3 1 LGD -0.0356
44 C26 -0.7571 3.9832 1.6629 C.3 1 LGD -0.0428
45 C27 -4.6459 5.3521 -5.5053 C.3 1 LGD 0.1223
46 C28 -2.6973 7.8577 -0.7473 C.3 1 LGD -0.0323
47 C29 -2.6241 -1.4637 1.2122 C.3 1 LGD -0.0597
48 C30 -2.4660 -0.3758 2.3043 C.3 1 LGD -0.0949
49 C31 -3.8038 -2.4030 1.5594 C.3 1 LGD -0.0949
50 C32 2.5929 -1.0272 -3.1167 C.ar 1 LGD -0.1118
51 C33 3.0723 -2.3482 -3.0608 C.ar 1 LGD -0.0707
52 C34 4.3471 -2.6272 -2.5443 C.ar 1 LGD -0.1918
53 C35 5.1789 -1.5811 -2.0932 C.ar 1 LGD 0.0656
54 C36 4.6978 -0.2622 -2.1477 C.ar 1 LGD -0.1918
55 C37 3.4247 0.0169 -2.6676 C.ar 1 LGD -0.0707
56 N10 6.4368 -1.7852 -1.5348 N.am 1 LGD -0.4981
57 C38 7.2989 -2.8337 -1.8139 C.2 1 LGD 0.7855
58 N11 7.1264 -3.6936 -2.8750 N.am 1 LGD -0.6911
59 O10 8.2823 -2.9731 -1.1135 O.2 1 LGD -0.6387
60 C39 -2.6202 -1.1019 -5.5446 C.ar 1 LGD -0.1128
61 C40 -1.4772 -1.6027 -6.1934 C.ar 1 LGD -0.1027
62 C41 -0.8781 -2.7936 -5.7509 C.ar 1 LGD -0.1622
63 C42 -1.3939 -3.4778 -4.6366 C.ar 1 LGD 0.0685
64 C43 -2.5817 -3.0111 -4.0349 C.ar 1 LGD -0.1622
65 C44 -3.1872 -1.8323 -4.4872 C.ar 1 LGD -0.1027
66 N12 -0.7143 -4.6000 -4.1750 N.am 1 LGD -0.4887
67 C45 -0.6464 -4.9803 -2.8390 C.2 1 LGD 0.6456
68 O11 -1.0312 -4.2236 -1.9634 O.2 1 LGD -0.5629
69 C46 -0.0474 -6.3603 -2.5133 C.3 1 LGD 0.0588
70 C47 -0.5086 -6.9027 -1.1348 C.3 1 LGD -0.1504
71 C48 0.2133 -6.1776 0.0008 C.2 1 LGD 0.7145
72 N13 1.5396 -5.8493 -0.1715 N.am 1 LGD -0.5692
73 C49 2.1516 -5.9866 -1.3994 C.2 1 LGD 0.8419
74 N14 1.4230 -6.2880 -2.5373 N.am 1 LGD -0.6118
75 O12 3.3545 -5.8404 -1.4881 O.2 1 LGD -0.6669
76 O13 -0.3338 -5.8777 1.0460 O.2 1 LGD -0.5849
77 O14 -5.6977 4.8989 -6.3527 O.3 1 LGD -0.5962
78 C50 -1.4971 8.1191 0.1584 C.ar 1 LGD -0.1865
79 C51 -0.3041 8.6459 -0.3653 C.ar 1 LGD -0.0799
80 C52 0.7832 8.8360 0.5005 C.ar 1 LGD -0.2416
81 C53 0.6412 8.4906 1.8546 C.ar 1 LGD 0.3756
82 N15 -0.4957 7.9766 2.3638 N.ar 1 LGD -0.6769
83 C54 -1.5405 7.7994 1.5306 C.ar 1 LGD 0.3960
84 C55 -0.4888 2.9307 2.7312 C.ar 1 LGD -0.0950
85 C56 0.5220 1.9705 2.5425 C.ar 1 LGD -0.1314
86 C57 0.7401 0.9719 3.5037 C.ar 1 LGD -0.1301
87 C58 -0.0429 0.9388 4.6671 C.ar 1 LGD 0.0276
88 C59 -1.0384 1.9068 4.8740 C.ar 1 LGD -0.1301
89 C60 -1.2586 2.9016 3.9080 C.ar 1 LGD -0.1314
90 Cl1 0.2176 -0.3195 5.8556 Cl 1 LGD -0.0792
91 C61 -5.7336 2.7174 0.0017 C.3 1 LGD -0.0530
92 C62 -5.4064 3.6584 1.1565 C.ar 1 LGD -0.0834
93 C63 -5.2382 3.1531 2.4599 C.ar 1 LGD -0.1329
94 C64 -4.8876 4.0113 3.5152 C.ar 1 LGD -0.0394
95 C65 -4.7141 5.3895 3.2715 C.ar 1 LGD -0.0432
96 C66 -4.9114 5.8993 1.9772 C.ar 1 LGD -0.1349
97 C67 -5.2544 5.0374 0.9246 C.ar 1 LGD -0.1320
98 C68 -4.7077 3.5006 4.8134 C.ar 1 LGD -0.1282
99 C69 -4.3456 4.3602 5.8628 C.ar 1 LGD -0.1278
100 C70 -4.1663 5.7312 5.6189 C.ar 1 LGD -0.1231
101 C71 -4.3525 6.2467 4.3260 C.ar 1 LGD -0.1219
102 C72 3.2039 4.5254 2.2482 C.3 1 LGD 0.1135
103 C73 4.3195 5.3936 1.6207 C.3 1 LGD -0.1273
104 C74 2.4838 5.2745 3.3882 C.3 1 LGD -0.1273
105 N16 4.6741 -4.8506 1.7864 N.am 1 LGD -0.4954
106 C75 5.1090 -6.1439 2.3689 C.3 1 LGD 0.0570
107 C76 6.2353 -6.6814 1.4612 C.3 1 LGD -0.0874
108 C77 6.7700 -5.4555 0.7126 C.3 1 LGD -0.0835
109 C78 5.6191 -4.4378 0.7318 C.3 1 LGD 0.0966
110 C79 3.9852 -7.1899 2.5190 C.2 1 LGD 0.6722
111 O15 2.8777 -7.0541 2.0307 O.2 1 LGD -0.5946
112 N17 4.2760 -8.3436 3.2315 N.am 1 LGD -0.5861
113 C80 3.3287 -9.4637 3.3647 C.3 1 LGD 0.0596
114 C81 4.0443 -10.8097 3.1580 C.2 1 LGD 0.6473
115 N18 3.2912 -11.9434 2.9415 N.am 1 LGD -0.6915
116 C82 2.6414 -9.3921 4.7463 C.3 1 LGD -0.1041
117 O16 5.2574 -10.9246 3.1562 O.2 1 LGD -0.6041
118 H1 -4.6622 0.9959 0.7913 H 1 LGD 0.0883
119 H2 -3.0283 2.8246 1.4756 H 1 LGD 0.3286
120 H3 -0.5723 2.6135 -0.0144 H 1 LGD 0.1114
121 H4 -2.9346 5.4016 0.2368 H 1 LGD 0.3276
122 H5 -1.6443 6.6335 -2.1807 H 1 LGD 0.0958
123 H6 -2.7417 4.5610 -3.2317 H 1 LGD 0.3393
124 H7 -5.6558 4.8056 -3.6650 H 1 LGD 0.1159
125 H8 -2.8279 3.2481 -5.4349 H 1 LGD 0.3296
126 H9 -3.4365 0.8345 -3.8179 H 1 LGD 0.0801
127 H10 -1.6384 -0.2768 -3.0167 H 1 LGD 0.3204
128 H11 0.8933 1.3181 -3.0576 H 1 LGD 0.1111
129 H12 -0.9329 -1.4736 -1.4798 H 1 LGD 0.3333
130 H13 0.0648 -0.6293 1.1910 H 1 LGD 0.0680
131 H14 1.5924 -1.9303 2.4703 H 1 LGD 0.3151
132 H15 3.7294 -2.7684 0.5455 H 1 LGD 0.1047
133 H16 -4.8341 0.8288 -2.1635 H 1 LGD 0.3389
134 H17 3.8016 -1.4502 3.3029 H 1 LGD 0.0571
135 H18 5.2505 -1.9098 2.4277 H 1 LGD 0.0571
136 H19 4.9762 -0.2543 0.7467 H 1 LGD 0.0676
137 H20 3.2421 -0.1077 1.0042 H 1 LGD 0.0676
138 H21 3.7753 0.8472 3.3437 H 1 LGD 0.0581
139 H22 5.4572 0.9742 2.8341 H 1 LGD 0.0581
140 H23 4.9281 2.6328 1.1613 H 1 LGD 0.1144
141 H24 3.2128 2.1669 1.1360 H 1 LGD 0.1144
142 H25 4.6093 3.5115 3.3448 H 1 LGD 0.4490
143 H26 -6.4452 -0.6385 -3.1274 H 1 LGD 0.0675
144 H27 -5.7779 -2.0728 -2.3041 H 1 LGD 0.0675
145 H28 -7.4902 -1.6182 -2.0653 H 1 LGD 0.0675
146 H29 -1.5098 -3.1135 0.3223 H 1 LGD 0.0754
147 H30 -1.0442 -2.7549 1.9731 H 1 LGD 0.0754
148 H31 0.5957 -1.6898 -3.5800 H 1 LGD 0.0660
149 H32 1.2291 -0.5034 -4.7083 H 1 LGD 0.0660
150 H33 -4.2434 0.2195 -6.0856 H 1 LGD 0.0719
151 H34 -2.6925 0.6790 -6.7859 H 1 LGD 0.0719
152 H35 0.1700 4.5319 1.4548 H 1 LGD 0.0585
153 H36 -1.4746 4.7279 2.0320 H 1 LGD 0.0585
154 H37 -4.7497 6.4306 -5.3315 H 1 LGD 0.0342
155 H38 -3.6754 5.1827 -5.9888 H 1 LGD 0.0342
156 H39 -2.8199 8.6902 -1.4521 H 1 LGD 0.0761
157 H40 -3.6189 7.8190 -0.1530 H 1 LGD 0.0761
158 H41 -2.8717 -0.9637 0.2669 H 1 LGD 0.0450
159 H42 -1.7741 0.4067 1.9758 H 1 LGD 0.0369
160 H43 -3.4262 0.1062 2.5253 H 1 LGD 0.0369
161 H44 -2.0827 -0.8071 3.2376 H 1 LGD 0.0369
162 H45 -3.5981 -2.9694 2.4767 H 1 LGD 0.0369
163 H46 -4.7269 -1.8312 1.7141 H 1 LGD 0.0369
164 H47 -3.9838 -3.1187 0.7471 H 1 LGD 0.0369
165 H48 2.4414 -3.1702 -3.3878 H 1 LGD 0.1383
166 H49 4.6519 -3.6644 -2.4641 H 1 LGD 0.1378
167 H50 5.3176 0.5563 -1.7926 H 1 LGD 0.1378
168 H51 3.0886 1.0484 -2.7069 H 1 LGD 0.1383
169 H52 6.8048 -1.0578 -0.9416 H 1 LGD 0.3342
170 H53 6.3386 -3.5751 -3.4938 H 1 LGD 0.3330
171 H54 7.8026 -4.4244 -3.0366 H 1 LGD 0.3330
172 H55 -1.0250 -1.0479 -7.0108 H 1 LGD 0.1410
173 H56 0.0242 -3.1514 -6.2387 H 1 LGD 0.1433
174 H57 -3.0416 -3.5496 -3.2120 H 1 LGD 0.1433
175 H58 -4.0768 -1.4629 -3.9869 H 1 LGD 0.1410
176 H59 -0.1138 -5.0861 -4.8236 H 1 LGD 0.3219
177 H60 -0.3841 -7.0538 -3.2942 H 1 LGD 0.0760
178 H61 -1.5948 -6.7990 -1.0164 H 1 LGD 0.0929
179 H62 -0.2648 -7.9701 -1.0625 H 1 LGD 0.0929
180 H63 2.0792 -5.5384 0.6220 H 1 LGD 0.3842
181 H64 1.9208 -6.4088 -3.4066 H 1 LGD 0.3417
182 H65 -5.6776 5.4432 -7.1595 H 1 LGD 0.4176
183 H66 -0.2204 8.8970 -1.4193 H 1 LGD 0.1503
184 H67 1.7201 9.2421 0.1312 H 1 LGD 0.1462
185 H68 1.4654 8.6254 2.5534 H 1 LGD 0.0141
186 H69 -2.4376 7.3750 1.9772 H 1 LGD 0.0231
187 H70 1.1259 1.9892 1.6422 H 1 LGD 0.1517
188 H71 1.5024 0.2169 3.3407 H 1 LGD 0.1516
189 H72 -1.6437 1.8837 5.7759 H 1 LGD 0.1516
190 H73 -2.0309 3.6466 4.0715 H 1 LGD 0.1517
191 H74 -5.7807 3.2737 -0.9439 H 1 LGD 0.0812
192 H75 -6.7356 2.2983 0.1592 H 1 LGD 0.0812
193 H76 -5.3743 2.0926 2.6531 H 1 LGD 0.1477
194 H77 -4.8034 6.9630 1.7869 H 1 LGD 0.1381
195 H78 -5.3994 5.4431 -0.0726 H 1 LGD 0.1510
196 H79 -4.8424 2.4404 5.0092 H 1 LGD 0.1409
197 H80 -4.2045 3.9642 6.8645 H 1 LGD 0.1388
198 H81 -3.8874 6.3951 6.4323 H 1 LGD 0.1408
199 H82 -4.2169 7.3097 4.1465 H 1 LGD 0.1400
200 H83 2.4720 4.2574 1.4832 H 1 LGD 0.1170
201 H84 4.8077 4.8696 0.7898 H 1 LGD 0.0745
202 H85 3.9032 6.3296 1.2274 H 1 LGD 0.0745
203 H86 5.0862 5.6469 2.3642 H 1 LGD 0.0745
204 H87 2.0007 6.1828 3.0097 H 1 LGD 0.0745
205 H88 1.7069 4.6421 3.8362 H 1 LGD 0.0745
206 H89 3.1882 5.5624 4.1791 H 1 LGD 0.0745
207 H90 5.5198 -5.9444 3.3667 H 1 LGD 0.0624
208 H91 7.0190 -7.1899 2.0368 H 1 LGD 0.0678
209 H92 5.8252 -7.3936 0.7324 H 1 LGD 0.0678
210 H93 7.6351 -5.0433 1.2477 H 1 LGD 0.0627
211 H94 7.0803 -5.7000 -0.3111 H 1 LGD 0.0627
212 H95 6.0104 -3.4332 0.9312 H 1 LGD 0.0515
213 H96 5.1027 -4.4392 -0.2347 H 1 LGD 0.0515
214 H97 5.2024 -8.4514 3.6182 H 1 LGD 0.3279
215 H98 2.5544 -9.3999 2.5896 H 1 LGD 0.0886
216 H99 2.2837 -11.8883 2.9285 H 1 LGD 0.3193
217 H100 3.7573 -12.8254 2.7895 H 1 LGD 0.3193
218 H101 3.3774 -9.4912 5.5544 H 1 LGD 0.0504
219 H102 2.1217 -8.4334 4.8706 H 1 LGD 0.0504
220 H103 1.9012 -10.1946 4.8558 H 1 LGD 0.0504
221 H104 3.0960 2.8864 3.4441 H 1 LGD 0.4490
@BOND
1 1 2 1
2 2 3 am
3 3 4 1
4 4 5 1
5 5 6 am
6 6 7 1
7 7 8 1
8 8 9 am
9 9 10 1
10 10 11 1
11 11 12 am
12 12 13 1
13 13 14 1
14 14 15 am
15 15 16 1
16 16 17 1
17 17 18 am
18 18 19 1
19 19 20 1
20 20 21 am
21 21 22 1
22 22 23 1
23 1 24 1
24 23 25 2
25 20 26 2
26 17 27 2
27 14 28 2
28 11 29 2
29 8 30 2
30 5 31 2
31 22 32 1
32 32 33 1
33 33 34 1
34 34 35 1
35 35 36 1
36 2 37 2
37 24 38 am
38 38 39 1
39 38 40 2
40 19 41 1
41 16 42 1
42 13 43 1
43 4 44 1
44 10 45 1
45 7 46 1
46 41 47 1
47 47 48 1
48 47 49 1
49 42 50 1
50 50 51 ar
51 51 52 ar
52 52 53 ar
53 53 54 ar
54 54 55 ar
55 50 55 ar
56 53 56 1
57 56 57 am
58 57 58 am
59 57 59 2
60 43 60 1
61 60 61 ar
62 61 62 ar
63 62 63 ar
64 63 64 ar
65 64 65 ar
66 60 65 ar
67 63 66 1
68 66 67 am
69 67 68 2
70 67 69 1
71 69 70 1
72 70 71 1
73 71 72 am
74 72 73 am
75 73 74 am
76 69 74 1
77 73 75 2
78 71 76 2
79 45 77 1
80 46 78 1
81 78 79 ar
82 79 80 ar
83 80 81 ar
84 81 82 ar
85 82 83 ar
86 78 83 ar
87 44 84 1
88 84 85 ar
89 85 86 ar
90 86 87 ar
91 87 88 ar
92 88 89 ar
93 84 89 ar
94 87 90 1
95 1 91 1
96 91 92 1
97 92 93 ar
98 93 94 ar
99 94 95 ar
100 95 96 ar
101 96 97 ar
102 92 97 ar
103 94 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 95 101 ar
108 36 102 1
109 102 103 1
110 102 104 1
111 23 105 am
112 105 106 1
113 106 107 1
114 107 108 1
115 108 109 1
116 105 109 1
117 106 110 1
118 110 111 2
119 110 112 am
120 112 113 1
121 113 114 1
122 114 115 am
123 113 116 1
124 114 117 2
125 1 118 1
126 3 119 1
127 4 120 1
128 6 121 1
129 7 122 1
130 9 123 1
131 10 124 1
132 12 125 1
133 13 126 1
134 15 127 1
135 16 128 1
136 18 129 1
137 19 130 1
138 21 131 1
139 22 132 1
140 24 133 1
141 32 134 1
142 32 135 1
143 33 136 1
144 33 137 1
145 34 138 1
146 34 139 1
147 35 140 1
148 35 141 1
149 36 142 1
150 39 143 1
151 39 144 1
152 39 145 1
153 41 146 1
154 41 147 1
155 42 148 1
156 42 149 1
157 43 150 1
158 43 151 1
159 44 152 1
160 44 153 1
161 45 154 1
162 45 155 1
163 46 156 1
164 46 157 1
165 47 158 1
166 48 159 1
167 48 160 1
168 48 161 1
169 49 162 1
170 49 163 1
171 49 164 1
172 51 165 1
173 52 166 1
174 54 167 1
175 55 168 1
176 56 169 1
177 58 170 1
178 58 171 1
179 61 172 1
180 62 173 1
181 64 174 1
182 65 175 1
183 66 176 1
184 69 177 1
185 70 178 1
186 70 179 1
187 72 180 1
188 74 181 1
189 77 182 1
190 79 183 1
191 80 184 1
192 81 185 1
193 83 186 1
194 85 187 1
195 86 188 1
196 88 189 1
197 89 190 1
198 91 191 1
199 91 192 1
200 93 193 1
201 96 194 1
202 97 195 1
203 98 196 1
204 99 197 1
205 100 198 1
206 101 199 1
207 102 200 1
208 103 201 1
209 103 202 1
210 103 203 1
211 104 204 1
212 104 205 1
213 104 206 1
214 106 207 1
215 107 208 1
216 107 209 1
217 108 210 1
218 108 211 1
219 109 212 1
220 109 213 1
221 112 214 1
222 113 215 1
223 115 216 1
224 115 217 1
225 116 218 1
226 116 219 1
227 116 220 1
228 36 221 1