@COMMENT
LIGANDBOX_ID = D08956-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D08956
NAME = Omacetaxine_mepesuccinate_(USAN)_Homoharringtonine_Synribo_(TN)
MOLECULAR_FORMULA = C29H39NO9
MOLECULAR_WEIGHT = 545.629
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 9
NUM_OF_CHIRAL_ATOMS = 4
TPSA = 123.9900
HOMO = -11.7407
LUMO = -3.4235
mLOGD = 1.545
mLOGS = -2.170
mLOGPA = -4.815
@MOLECULE
D08956-04
79 83 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.2215 2.6673 1.0456 C.ar 1 LGD -0.1089
2 C2 0.8296 1.4142 0.7915 C.ar 1 LGD -0.1183
3 C3 -0.0760 3.0049 2.3661 C.ar 1 LGD 0.0802
4 C4 1.1559 0.5497 1.8830 C.ar 1 LGD -0.1212
5 C5 1.1064 1.0054 -0.6584 C.3 1 LGD -0.0512
6 C6 0.2252 2.1778 3.4047 C.ar 1 LGD 0.0713
7 C7 1.8684 -0.8015 1.6928 C.3 1 LGD -0.0301
8 C8 0.8538 0.9498 3.2080 C.ar 1 LGD -0.0778
9 C9 2.6002 0.9162 -1.0120 C.3 1 LGD 0.1265
10 C10 3.1844 -0.7355 0.8200 C.3 1 LGD 0.1999
11 C11 1.0161 -2.0076 1.1390 C.3 1 LGD 0.2079
12 N1 3.4296 0.5732 0.1617 N.4 1 LGD -0.6523
13 C12 3.0026 -1.8579 -0.1719 C.2 1 LGD -0.3636
14 C13 1.8710 -2.5258 0.0152 C.2 1 LGD 0.1728
15 O1 1.4206 -3.6321 -0.6516 O.3 1 LGD -0.2841
16 O2 -0.6805 4.1387 2.8137 O.3 1 LGD -0.3087
17 C14 -0.7890 4.0013 4.2619 C.3 1 LGD 0.3241
18 O3 -0.1639 2.7252 4.5876 O.3 1 LGD -0.3100
19 C15 5.5727 -0.1597 0.9104 C.3 1 LGD -0.1060
20 C16 4.8515 0.5563 -0.2374 C.3 1 LGD 0.1055
21 C17 4.4747 -0.9333 1.6543 C.3 1 LGD -0.0943
22 C18 2.2276 -4.2083 -1.6920 C.3 1 LGD 0.1160
23 O4 -0.2901 -1.6525 0.6226 O.3 1 LGD -0.4157
24 C19 -1.3356 -1.3843 1.4653 C.2 1 LGD 0.6175
25 C20 -2.7131 -1.4093 0.7433 C.3 1 LGD 0.1404
26 O5 -1.2186 -1.2003 2.6664 O.2 1 LGD -0.5108
27 C21 -3.1881 -2.8922 0.6221 C.3 1 LGD -0.1520
28 C22 -2.2582 -3.7968 -0.1954 C.2 1 LGD 0.6388
29 O6 -2.4712 -3.6635 -1.5388 O.3 1 LGD -0.4299
30 O7 -1.4597 -4.5699 0.3075 O.2 1 LGD -0.5166
31 C23 -1.6806 -4.4394 -2.4558 C.3 1 LGD 0.1288
32 C24 -2.7125 -0.7173 -0.6672 C.3 1 LGD -0.0679
33 C25 -2.6671 0.8356 -0.6734 C.3 1 LGD -0.0810
34 C26 -2.8156 1.3848 -2.1236 C.3 1 LGD -0.1159
35 C27 -2.7335 2.9368 -2.2811 C.3 1 LGD 0.1579
36 O8 -1.4230 3.3708 -1.9413 O.3 1 LGD -0.6059
37 C28 -3.7478 3.6739 -1.3670 C.3 1 LGD -0.0978
38 C29 -2.9930 3.3206 -3.7606 C.3 1 LGD -0.0978
39 O9 -3.6582 -0.7388 1.5842 O.3 1 LGD -0.5786
40 H1 -0.0208 3.3559 0.2440 H 1 LGD 0.1752
41 H2 0.6418 0.0406 -0.8782 H 1 LGD 0.0882
42 H3 0.6374 1.7070 -1.3566 H 1 LGD 0.0882
43 H4 2.1772 -1.1389 2.6901 H 1 LGD 0.0921
44 H5 1.0866 0.3168 4.0596 H 1 LGD 0.1691
45 H6 2.7503 0.1753 -1.7993 H 1 LGD 0.0959
46 H7 2.9314 1.8873 -1.3840 H 1 LGD 0.0959
47 H8 0.9153 -2.7852 1.9074 H 1 LGD 0.1142
48 H9 3.7657 -2.0825 -0.9143 H 1 LGD 0.1639
49 H10 -0.2563 4.8196 4.7597 H 1 LGD 0.0896
50 H11 -1.8446 3.9840 4.5570 H 1 LGD 0.0896
51 H12 6.3495 -0.8299 0.5214 H 1 LGD 0.0882
52 H13 6.0450 0.5712 1.5789 H 1 LGD 0.0882
53 H14 5.2299 1.5682 -0.3934 H 1 LGD 0.1010
54 H15 4.9545 -0.0254 -1.1555 H 1 LGD 0.1010
55 H16 4.3579 -0.5044 2.6581 H 1 LGD 0.0895
56 H17 4.7293 -1.9953 1.7660 H 1 LGD 0.0895
57 H18 1.7273 -5.0935 -2.1034 H 1 LGD 0.0562
58 H19 2.3817 -3.4836 -2.5010 H 1 LGD 0.0562
59 H20 3.2027 -4.5140 -1.2917 H 1 LGD 0.0562
60 H21 -3.2873 -3.3305 1.6237 H 1 LGD 0.0986
61 H22 -4.1865 -2.9257 0.1666 H 1 LGD 0.0986
62 H23 -1.8184 -5.5114 -2.2666 H 1 LGD 0.0486
63 H24 -1.9847 -4.2222 -3.4871 H 1 LGD 0.0486
64 H25 -0.6185 -4.1905 -2.3458 H 1 LGD 0.0486
65 H26 -1.8791 -1.0955 -1.2723 H 1 LGD 0.0654
66 H27 -3.6237 -1.0226 -1.1982 H 1 LGD 0.0654
67 H28 -3.4838 1.2288 -0.0566 H 1 LGD 0.0488
68 H29 -1.7303 1.1797 -0.2262 H 1 LGD 0.0488
69 H30 -2.0478 0.9235 -2.7592 H 1 LGD 0.0502
70 H31 -3.7806 1.0445 -2.5220 H 1 LGD 0.0502
71 H32 -0.9969 2.6299 -1.4783 H 1 LGD 0.3857
72 H33 -4.7662 3.2998 -1.5319 H 1 LGD 0.0458
73 H34 -3.5021 3.5417 -0.3059 H 1 LGD 0.0458
74 H35 -3.7484 4.7517 -1.5746 H 1 LGD 0.0458
75 H36 -2.8979 4.4041 -3.9091 H 1 LGD 0.0458
76 H37 -2.2782 2.8220 -4.4280 H 1 LGD 0.0458
77 H38 -4.0042 3.0266 -4.0698 H 1 LGD 0.0458
78 H39 -3.2657 -0.6961 2.4755 H 1 LGD 0.4350
79 H40 3.3015 1.2894 0.8634 H 1 LGD 0.4536
@BOND
1 1 2 ar
2 1 3 ar
3 2 4 ar
4 2 5 1
5 3 6 ar
6 4 7 1
7 4 8 ar
8 5 9 1
9 7 10 1
10 7 11 1
11 9 12 1
12 10 13 1
13 11 14 1
14 14 15 1
15 6 8 ar
16 10 12 1
17 13 14 2
18 3 16 1
19 16 17 1
20 17 18 1
21 6 18 1
22 19 20 1
23 12 20 1
24 10 21 1
25 19 21 1
26 15 22 1
27 11 23 1
28 23 24 1
29 24 25 1
30 24 26 2
31 25 27 1
32 27 28 1
33 28 29 1
34 28 30 2
35 29 31 1
36 25 32 1
37 32 33 1
38 33 34 1
39 34 35 1
40 35 36 1
41 35 37 1
42 35 38 1
43 25 39 1
44 1 40 1
45 5 41 1
46 5 42 1
47 7 43 1
48 8 44 1
49 9 45 1
50 9 46 1
51 11 47 1
52 13 48 1
53 17 49 1
54 17 50 1
55 19 51 1
56 19 52 1
57 20 53 1
58 20 54 1
59 21 55 1
60 21 56 1
61 22 57 1
62 22 58 1
63 22 59 1
64 27 60 1
65 27 61 1
66 31 62 1
67 31 63 1
68 31 64 1
69 32 65 1
70 32 66 1
71 33 67 1
72 33 68 1
73 34 69 1
74 34 70 1
75 36 71 1
76 37 72 1
77 37 73 1
78 37 74 1
79 38 75 1
80 38 76 1
81 38 77 1
82 39 78 1
83 12 79 1