@COMMENT
LIGANDBOX_ID = D09400-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09400
NAME = Degarelix_acetate_(JAN)_Firmagon_(TN)
MOLECULAR_FORMULA = C82H103N18O16Cl
MOLECULAR_WEIGHT = 1632.289
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 19
NUM_OF_ACCEPTOR = 17
NUM_OF_CHIRAL_ATOMS = 11
TPSA = 512.8700
HOMO = -10.1033
LUMO = -3.7086
mLOGD = 1.304
mLOGS = -4.578
mLOGPA = -8.135
@MOLECULE
D09400-02
221 228 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -5.1062 2.0263 -0.9450 C.3 1 LGD 0.0682
2 C2 -4.7063 2.7835 -2.2195 C.2 1 LGD 0.6573
3 N1 -3.5666 2.3986 -2.9157 N.am 1 LGD -0.5840
4 C3 -3.1234 3.0775 -4.1485 C.3 1 LGD 0.0580
5 C4 -1.7303 3.7089 -3.9884 C.2 1 LGD 0.6608
6 N2 -1.3151 4.5925 -4.9739 N.am 1 LGD -0.5845
7 C5 0.0367 5.1732 -5.0209 C.3 1 LGD 0.0514
8 C6 0.6272 5.0330 -6.4379 C.2 1 LGD 0.6519
9 N3 1.9582 5.3633 -6.6322 N.am 1 LGD -0.5901
10 C7 2.7653 4.7489 -7.6969 C.3 1 LGD 0.0585
11 C8 3.1092 3.3172 -7.2618 C.2 1 LGD 0.6463
12 N4 3.7343 3.1492 -6.0369 N.am 1 LGD -0.5824
13 C9 3.6353 1.9172 -5.2422 C.3 1 LGD 0.0604
14 C10 2.8830 2.2197 -3.9311 C.2 1 LGD 0.6545
15 N5 2.2136 1.1804 -3.3034 N.am 1 LGD -0.5936
16 C11 1.6632 1.2829 -1.9390 C.3 1 LGD 0.0705
17 C12 0.7761 0.0589 -1.6850 C.2 1 LGD 0.6729
18 N6 1.3554 -1.1961 -1.8140 N.am 1 LGD -0.5970
19 C13 0.6342 -2.4422 -1.5279 C.3 1 LGD 0.0644
20 C14 0.6472 -2.6676 -0.0077 C.2 1 LGD 0.6567
21 N7 -0.4276 -2.1937 0.7260 N.am 1 LGD -0.5858
22 C15 -0.5624 -2.4115 2.1730 C.3 1 LGD 0.0588
23 C16 -1.4612 -3.6444 2.4261 C.2 1 LGD 0.6674
24 N8 -5.6604 0.6975 -1.2509 N.am 1 LGD -0.6086
25 O1 -2.6671 -3.5873 2.2468 O.2 1 LGD -0.5881
26 O2 1.5653 -3.2352 0.5596 O.2 1 LGD -0.6074
27 O3 -0.4039 0.1626 -1.3917 O.2 1 LGD -0.6109
28 O4 2.8454 3.3397 -3.4468 O.2 1 LGD -0.6104
29 O5 2.7997 2.3458 -7.9299 O.2 1 LGD -0.5810
30 O6 -0.0236 4.6102 -7.3796 O.2 1 LGD -0.5893
31 O7 -1.0043 3.4663 -3.0377 O.2 1 LGD -0.6046
32 C17 -1.1681 -1.1366 2.8107 C.3 1 LGD -0.0911
33 C18 -1.2263 -1.2407 4.3575 C.3 1 LGD -0.0786
34 C19 -2.0453 -0.1145 5.0231 C.3 1 LGD -0.1052
35 C20 -1.5500 1.2943 4.6590 C.3 1 LGD 0.0960
36 N9 -2.4914 2.3049 5.1736 N.4 1 LGD -0.7506
37 O8 -5.3687 3.7272 -2.6163 O.2 1 LGD -0.5633
38 C21 -6.9762 0.5185 -1.6476 C.2 1 LGD 0.6564
39 C22 -7.5603 -0.8900 -1.6001 C.3 1 LGD -0.1648
40 O9 -7.6409 1.4734 -2.0095 O.2 1 LGD -0.5585
41 C23 1.3053 -3.5907 -2.3340 C.3 1 LGD -0.0814
42 C24 2.8372 1.3562 -0.9234 C.3 1 LGD -0.0585
43 C25 5.0645 1.3702 -4.9851 C.3 1 LGD -0.0351
44 C26 -3.1850 2.1026 -5.3516 C.3 1 LGD -0.0433
45 C27 4.0223 5.6151 -7.9685 C.3 1 LGD 0.1254
46 C28 -0.0173 6.6457 -4.5369 C.3 1 LGD -0.0351
47 C29 0.4096 -4.8432 -2.5710 C.3 1 LGD -0.0641
48 C30 -0.1540 -5.4699 -1.2689 C.3 1 LGD -0.0917
49 C31 1.1944 -5.9049 -3.3801 C.3 1 LGD -0.0917
50 C32 2.4271 1.3053 0.5444 C.ar 1 LGD -0.1086
51 C33 2.4685 0.0868 1.2395 C.ar 1 LGD -0.0805
52 C34 2.2230 0.0347 2.6188 C.ar 1 LGD -0.1815
53 C35 1.9419 1.2182 3.3384 C.ar 1 LGD 0.0708
54 C36 1.8570 2.4306 2.6270 C.ar 1 LGD -0.1815
55 C37 2.1000 2.4777 1.2437 C.ar 1 LGD -0.0805
56 N10 1.7213 1.2841 4.7145 N.am 1 LGD -0.5019
57 C38 1.8863 0.2769 5.6572 C.2 1 LGD 0.7776
58 N11 1.4114 0.4928 6.9295 N.am 1 LGD -0.7141
59 O10 2.4372 -0.7820 5.4273 O.2 1 LGD -0.5891
60 C39 5.0880 0.1326 -4.0925 C.ar 1 LGD -0.1154
61 C40 5.6366 0.1986 -2.8007 C.ar 1 LGD -0.1005
62 C41 5.6268 -0.9286 -1.9636 C.ar 1 LGD -0.1675
63 C42 5.0492 -2.1409 -2.4008 C.ar 1 LGD 0.0628
64 C43 4.5512 -2.2155 -3.7139 C.ar 1 LGD -0.1675
65 C44 4.5695 -1.0887 -4.5526 C.ar 1 LGD -0.1005
66 N12 4.9921 -3.2928 -1.6180 N.am 1 LGD -0.4854
67 C45 4.9086 -3.3339 -0.2278 C.2 1 LGD 0.6675
68 O11 4.7734 -2.3083 0.4174 O.2 1 LGD -0.5664
69 C46 4.9535 -4.7118 0.4664 C.3 1 LGD 0.0610
70 C47 3.9704 -5.7346 -0.1568 C.3 1 LGD -0.1735
71 C48 3.8960 -7.0005 0.6958 C.2 1 LGD 0.7012
72 N13 3.9719 -6.8850 2.0680 N.am 1 LGD -0.6031
73 C49 4.2484 -5.6691 2.6585 C.2 1 LGD 0.8262
74 N14 4.6574 -4.5848 1.9043 N.am 1 LGD -0.5896
75 O12 4.1343 -5.5511 3.8626 O.2 1 LGD -0.6409
76 O13 3.7692 -8.1096 0.2125 O.2 1 LGD -0.5853
77 O14 4.7632 5.8625 -6.7720 O.3 1 LGD -0.6236
78 C50 1.3691 7.2617 -4.3770 C.ar 1 LGD -0.2260
79 C51 2.2779 6.7508 -3.4332 C.ar 1 LGD -0.0867
80 C52 3.5557 7.3229 -3.3534 C.ar 1 LGD -0.2440
81 C53 3.8788 8.3851 -4.2139 C.ar 1 LGD 0.4007
82 N15 3.0123 8.8843 -5.1174 N.ar 1 LGD -0.6659
83 C54 1.7838 8.3340 -5.1923 C.ar 1 LGD 0.4083
84 C55 -2.0084 1.1320 -5.4230 C.ar 1 LGD -0.0874
85 C56 -0.9851 1.3404 -6.3679 C.ar 1 LGD -0.1067
86 C57 0.0804 0.4346 -6.4731 C.ar 1 LGD -0.1206
87 C58 0.1249 -0.6897 -5.6373 C.ar 1 LGD 0.0116
88 C59 -0.8859 -0.9031 -4.6882 C.ar 1 LGD -0.1206
89 C60 -1.9492 0.0074 -4.5783 C.ar 1 LGD -0.1067
90 Cl1 1.4209 -1.8477 -5.8096 Cl 1 LGD -0.1328
91 C61 -3.9341 1.8769 0.0539 C.3 1 LGD -0.0603
92 C62 -4.4383 1.4241 1.4183 C.ar 1 LGD -0.0617
93 C63 -4.8074 2.3797 2.3812 C.ar 1 LGD -0.1564
94 C64 -5.2858 1.9733 3.6377 C.ar 1 LGD -0.0687
95 C65 -5.4104 0.6002 3.9316 C.ar 1 LGD -0.0605
96 C66 -5.0702 -0.3560 2.9584 C.ar 1 LGD -0.1032
97 C67 -4.5805 0.0554 1.7100 C.ar 1 LGD -0.1216
98 C68 -5.6272 2.9306 4.6082 C.ar 1 LGD -0.1729
99 C69 -6.0495 2.5210 5.8826 C.ar 1 LGD -0.1279
100 C70 -6.1538 1.1537 6.1826 C.ar 1 LGD -0.1425
101 C71 -5.8463 0.1938 5.2055 C.ar 1 LGD -0.1089
102 C72 -1.8568 3.6389 5.2094 C.3 1 LGD 0.1198
103 C73 -2.7384 4.5858 6.0506 C.3 1 LGD -0.1252
104 C74 -1.6507 4.1904 3.7772 C.3 1 LGD -0.1252
105 N16 -0.8583 -4.7850 2.9602 N.am 1 LGD -0.5143
106 C75 -1.6273 -5.8465 3.6357 C.3 1 LGD 0.0490
107 C76 -0.6597 -7.0296 3.8428 C.3 1 LGD -0.0886
108 C77 0.7472 -6.4243 3.7380 C.3 1 LGD -0.0959
109 C78 0.5733 -5.1351 2.9166 C.3 1 LGD 0.0972
110 C79 -2.1719 -5.3166 4.9726 C.2 1 LGD 0.6575
111 O15 -3.3506 -5.4185 5.2670 O.2 1 LGD -0.5818
112 N17 -1.2891 -4.7031 5.8517 N.am 1 LGD -0.5882
113 C80 -1.6559 -4.3516 7.2327 C.3 1 LGD 0.0573
114 C81 -1.4518 -5.5513 8.1772 C.2 1 LGD 0.6424
115 N18 -1.9895 -5.5059 9.4454 N.am 1 LGD -0.6932
116 C82 -0.8218 -3.1339 7.6897 C.3 1 LGD -0.1037
117 O16 -0.8390 -6.5549 7.8577 O.2 1 LGD -0.5844
118 H1 -5.8834 2.6295 -0.4571 H 1 LGD 0.1008
119 H2 -3.0018 1.6481 -2.5452 H 1 LGD 0.3268
120 H3 -3.8017 3.9077 -4.3791 H 1 LGD 0.1028
121 H4 -1.9403 4.7775 -5.7448 H 1 LGD 0.3295
122 H5 0.7025 4.6118 -4.3546 H 1 LGD 0.1091
123 H6 2.4450 5.8402 -5.8859 H 1 LGD 0.3343
124 H7 2.1801 4.6852 -8.6233 H 1 LGD 0.1218
125 H8 4.0713 3.9817 -5.5733 H 1 LGD 0.3388
126 H9 3.0561 1.1568 -5.7812 H 1 LGD 0.0943
127 H10 2.1879 0.2840 -3.7677 H 1 LGD 0.3227
128 H11 1.0383 2.1808 -1.8493 H 1 LGD 0.1223
129 H12 2.3335 -1.2490 -2.0606 H 1 LGD 0.3321
130 H13 -0.4094 -2.3446 -1.8523 H 1 LGD 0.0809
131 H14 -1.1478 -1.6777 0.2410 H 1 LGD 0.3335
132 H15 0.4230 -2.5629 2.6245 H 1 LGD 0.0981
133 H16 -5.1232 -0.1194 -1.0016 H 1 LGD 0.3075
134 H17 -0.5655 -0.2664 2.5228 H 1 LGD 0.0569
135 H18 -2.1738 -0.9667 2.4108 H 1 LGD 0.0569
136 H19 -1.6839 -2.1945 4.6447 H 1 LGD 0.0733
137 H20 -0.2078 -1.2523 4.7608 H 1 LGD 0.0733
138 H21 -2.0169 -0.2360 6.1130 H 1 LGD 0.0615
139 H22 -3.0890 -0.2273 4.7276 H 1 LGD 0.0615
140 H23 -0.5753 1.4562 5.1169 H 1 LGD 0.1040
141 H24 -1.4600 1.4041 3.5768 H 1 LGD 0.1040
142 H25 -2.7583 2.0481 6.1137 H 1 LGD 0.4566
143 H26 -8.1320 -1.0186 -0.6724 H 1 LGD 0.0654
144 H27 -8.2236 -1.0564 -2.4578 H 1 LGD 0.0654
145 H28 -6.7594 -1.6395 -1.6212 H 1 LGD 0.0654
146 H29 1.5845 -3.2009 -3.3196 H 1 LGD 0.0552
147 H30 2.2485 -3.8821 -1.8599 H 1 LGD 0.0552
148 H31 3.5229 0.5260 -1.1208 H 1 LGD 0.0700
149 H32 3.4193 2.2688 -1.1014 H 1 LGD 0.0700
150 H33 5.5331 1.1330 -5.9490 H 1 LGD 0.0704
151 H34 5.6757 2.1655 -4.5387 H 1 LGD 0.0704
152 H35 -4.1310 1.5463 -5.3220 H 1 LGD 0.0707
153 H36 -3.2233 2.6957 -6.2743 H 1 LGD 0.0707
154 H37 4.6572 5.1077 -8.7058 H 1 LGD 0.0479
155 H38 3.7034 6.5699 -8.4055 H 1 LGD 0.0479
156 H39 -0.6238 7.2358 -5.2364 H 1 LGD 0.0648
157 H40 -0.5371 6.6850 -3.5707 H 1 LGD 0.0648
158 H41 -0.4464 -4.5303 -3.1833 H 1 LGD 0.0508
159 H42 -0.8624 -4.7934 -0.7758 H 1 LGD 0.0390
160 H43 -0.6951 -6.3984 -1.4906 H 1 LGD 0.0390
161 H44 0.6494 -5.7102 -0.5625 H 1 LGD 0.0390
162 H45 1.5653 -5.4824 -4.3228 H 1 LGD 0.0390
163 H46 2.0560 -6.2752 -2.8096 H 1 LGD 0.0390
164 H47 0.5540 -6.7616 -3.6255 H 1 LGD 0.0390
165 H48 2.7174 -0.8262 0.7115 H 1 LGD 0.1544
166 H49 2.2628 -0.9365 3.0955 H 1 LGD 0.1407
167 H50 1.6298 3.3524 3.1551 H 1 LGD 0.1407
168 H51 2.0664 3.4307 0.7228 H 1 LGD 0.1544
169 H52 1.4146 2.1749 5.0726 H 1 LGD 0.2951
170 H53 0.9615 1.3637 7.1650 H 1 LGD 0.3207
171 H54 1.5271 -0.2276 7.6266 H 1 LGD 0.3207
172 H55 6.0659 1.1281 -2.4369 H 1 LGD 0.1468
173 H56 6.0837 -0.8437 -0.9832 H 1 LGD 0.1475
174 H57 4.1348 -3.1481 -4.0848 H 1 LGD 0.1475
175 H58 4.1793 -1.1631 -5.5632 H 1 LGD 0.1468
176 H59 4.8655 -4.1684 -2.1026 H 1 LGD 0.3229
177 H60 5.9741 -5.0987 0.3518 H 1 LGD 0.0777
178 H61 2.9645 -5.3061 -0.1993 H 1 LGD 0.0935
179 H62 4.2736 -5.9975 -1.1779 H 1 LGD 0.0935
180 H63 3.8076 -7.6930 2.6470 H 1 LGD 0.3646
181 H64 4.7974 -3.6968 2.3647 H 1 LGD 0.3706
182 H65 5.4870 6.4727 -6.9998 H 1 LGD 0.4247
183 H66 2.0028 5.9260 -2.7811 H 1 LGD 0.1545
184 H67 4.2845 6.9506 -2.6395 H 1 LGD 0.1449
185 H68 4.8623 8.8514 -4.1791 H 1 LGD 0.0242
186 H69 1.1161 8.7570 -5.9417 H 1 LGD 0.0281
187 H70 -1.0234 2.1956 -7.0355 H 1 LGD 0.1485
188 H71 0.8561 0.5937 -7.2163 H 1 LGD 0.1518
189 H72 -0.8564 -1.7812 -4.0515 H 1 LGD 0.1518
190 H73 -2.7354 -0.1729 -3.8510 H 1 LGD 0.1485
191 H74 -3.1913 1.1686 -0.3366 H 1 LGD 0.0706
192 H75 -3.4176 2.8407 0.1522 H 1 LGD 0.0706
193 H76 -4.7197 3.4380 2.1512 H 1 LGD 0.1435
194 H77 -5.1620 -1.4169 3.1755 H 1 LGD 0.1660
195 H78 -4.3089 -0.6927 0.9704 H 1 LGD 0.1505
196 H79 -5.5572 3.9901 4.3793 H 1 LGD 0.1421
197 H80 -6.2992 3.2624 6.6364 H 1 LGD 0.1467
198 H81 -6.4804 0.8376 7.1695 H 1 LGD 0.1516
199 H82 -5.9330 -0.8629 5.4435 H 1 LGD 0.1570
200 H83 -0.8867 3.5440 5.7013 H 1 LGD 0.0892
201 H84 -2.2294 5.5446 6.2099 H 1 LGD 0.0748
202 H85 -3.6926 4.7899 5.5519 H 1 LGD 0.0748
203 H86 -2.9511 4.1492 7.0346 H 1 LGD 0.0748
204 H87 -2.6040 4.2578 3.2393 H 1 LGD 0.0748
205 H88 -1.2076 5.1936 3.8129 H 1 LGD 0.0748
206 H89 -0.9742 3.5510 3.1972 H 1 LGD 0.0748
207 H90 -2.4749 -6.1540 3.0095 H 1 LGD 0.1053
208 H91 -0.8197 -7.5404 4.8015 H 1 LGD 0.0753
209 H92 -0.8022 -7.7620 3.0377 H 1 LGD 0.0753
210 H93 1.1207 -6.1772 4.7403 H 1 LGD 0.0658
211 H94 1.4541 -7.1178 3.2674 H 1 LGD 0.0658
212 H95 1.1923 -4.3357 3.3410 H 1 LGD 0.0568
213 H96 0.8642 -5.3188 1.8754 H 1 LGD 0.0568
214 H97 -0.3276 -4.5979 5.5635 H 1 LGD 0.3247
215 H98 -2.7166 -4.0731 7.2778 H 1 LGD 0.0836
216 H99 -2.5099 -4.6961 9.7476 H 1 LGD 0.3172
217 H100 -1.8570 -6.2899 10.0669 H 1 LGD 0.3172
218 H101 -1.0801 -2.8478 8.7170 H 1 LGD 0.0430
219 H102 0.2520 -3.3578 7.6550 H 1 LGD 0.0430
220 H103 -1.0119 -2.2682 7.0459 H 1 LGD 0.0430
221 H104 -3.3238 2.3259 4.5991 H 1 LGD 0.4566
@BOND
1 1 2 1
2 2 3 am
3 3 4 1
4 4 5 1
5 5 6 am
6 6 7 1
7 7 8 1
8 8 9 am
9 9 10 1
10 10 11 1
11 11 12 am
12 12 13 1
13 13 14 1
14 14 15 am
15 15 16 1
16 16 17 1
17 17 18 am
18 18 19 1
19 19 20 1
20 20 21 am
21 21 22 1
22 22 23 1
23 1 24 1
24 23 25 2
25 20 26 2
26 17 27 2
27 14 28 2
28 11 29 2
29 8 30 2
30 5 31 2
31 22 32 1
32 32 33 1
33 33 34 1
34 34 35 1
35 35 36 1
36 2 37 2
37 24 38 am
38 38 39 1
39 38 40 2
40 19 41 1
41 16 42 1
42 13 43 1
43 4 44 1
44 10 45 1
45 7 46 1
46 41 47 1
47 47 48 1
48 47 49 1
49 42 50 1
50 50 51 ar
51 51 52 ar
52 52 53 ar
53 53 54 ar
54 54 55 ar
55 50 55 ar
56 53 56 1
57 56 57 am
58 57 58 am
59 57 59 2
60 43 60 1
61 60 61 ar
62 61 62 ar
63 62 63 ar
64 63 64 ar
65 64 65 ar
66 60 65 ar
67 63 66 1
68 66 67 am
69 67 68 2
70 67 69 1
71 69 70 1
72 70 71 1
73 71 72 am
74 72 73 am
75 73 74 am
76 69 74 1
77 73 75 2
78 71 76 2
79 45 77 1
80 46 78 1
81 78 79 ar
82 79 80 ar
83 80 81 ar
84 81 82 ar
85 82 83 ar
86 78 83 ar
87 44 84 1
88 84 85 ar
89 85 86 ar
90 86 87 ar
91 87 88 ar
92 88 89 ar
93 84 89 ar
94 87 90 1
95 1 91 1
96 91 92 1
97 92 93 ar
98 93 94 ar
99 94 95 ar
100 95 96 ar
101 96 97 ar
102 92 97 ar
103 94 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 95 101 ar
108 36 102 1
109 102 103 1
110 102 104 1
111 23 105 am
112 105 106 1
113 106 107 1
114 107 108 1
115 108 109 1
116 105 109 1
117 106 110 1
118 110 111 2
119 110 112 am
120 112 113 1
121 113 114 1
122 114 115 am
123 113 116 1
124 114 117 2
125 1 118 1
126 3 119 1
127 4 120 1
128 6 121 1
129 7 122 1
130 9 123 1
131 10 124 1
132 12 125 1
133 13 126 1
134 15 127 1
135 16 128 1
136 18 129 1
137 19 130 1
138 21 131 1
139 22 132 1
140 24 133 1
141 32 134 1
142 32 135 1
143 33 136 1
144 33 137 1
145 34 138 1
146 34 139 1
147 35 140 1
148 35 141 1
149 36 142 1
150 39 143 1
151 39 144 1
152 39 145 1
153 41 146 1
154 41 147 1
155 42 148 1
156 42 149 1
157 43 150 1
158 43 151 1
159 44 152 1
160 44 153 1
161 45 154 1
162 45 155 1
163 46 156 1
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165 47 158 1
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167 48 160 1
168 48 161 1
169 49 162 1
170 49 163 1
171 49 164 1
172 51 165 1
173 52 166 1
174 54 167 1
175 55 168 1
176 56 169 1
177 58 170 1
178 58 171 1
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180 62 173 1
181 64 174 1
182 65 175 1
183 66 176 1
184 69 177 1
185 70 178 1
186 70 179 1
187 72 180 1
188 74 181 1
189 77 182 1
190 79 183 1
191 80 184 1
192 81 185 1
193 83 186 1
194 85 187 1
195 86 188 1
196 88 189 1
197 89 190 1
198 91 191 1
199 91 192 1
200 93 193 1
201 96 194 1
202 97 195 1
203 98 196 1
204 99 197 1
205 100 198 1
206 101 199 1
207 102 200 1
208 103 201 1
209 103 202 1
210 103 203 1
211 104 204 1
212 104 205 1
213 104 206 1
214 106 207 1
215 107 208 1
216 107 209 1
217 108 210 1
218 108 211 1
219 109 212 1
220 109 213 1
221 112 214 1
222 113 215 1
223 115 216 1
224 115 217 1
225 116 218 1
226 116 219 1
227 116 220 1
228 36 221 1