@COMMENT
LIGANDBOX_ID = D09400-03
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09400
NAME = Degarelix_acetate_(JAN)_Firmagon_(TN)
MOLECULAR_FORMULA = C82H103N18O16Cl
MOLECULAR_WEIGHT = 1632.289
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 19
NUM_OF_ACCEPTOR = 17
NUM_OF_CHIRAL_ATOMS = 11
TPSA = 512.8700
HOMO = -10.1033
LUMO = -3.7086
mLOGD = 1.304
mLOGS = -4.578
mLOGPA = -8.135
@MOLECULE
D09400-03
221 228 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -6.6279 -0.7441 4.1066 C.3 1 LGD 0.0678
2 C2 -7.1466 0.6060 3.5770 C.2 1 LGD 0.6598
3 N1 -6.3675 1.3231 2.6798 N.am 1 LGD -0.5779
4 C3 -6.5809 2.7555 2.4049 C.3 1 LGD 0.0602
5 C4 -5.2556 3.5270 2.5284 C.2 1 LGD 0.6654
6 N2 -5.2882 4.9108 2.4207 N.am 1 LGD -0.5787
7 C5 -4.0696 5.7390 2.4100 C.3 1 LGD 0.0498
8 C6 -4.0505 6.6754 1.1871 C.2 1 LGD 0.6555
9 N3 -2.8700 7.3378 0.8918 N.am 1 LGD -0.5903
10 C7 -2.5464 7.8041 -0.4649 C.3 1 LGD 0.0591
11 C8 -2.0488 6.5980 -1.2740 C.2 1 LGD 0.6471
12 N4 -0.9503 5.9060 -0.7918 N.am 1 LGD -0.5803
13 C9 -0.7278 4.4766 -1.0507 C.3 1 LGD 0.0601
14 C10 -0.9437 3.6803 0.2577 C.2 1 LGD 0.6418
15 N5 -1.1020 2.3014 0.1851 N.am 1 LGD -0.5900
16 C11 -1.3516 1.4547 1.3621 C.3 1 LGD 0.0634
17 C12 -0.0459 1.1508 2.1296 C.2 1 LGD 0.6383
18 N6 0.6678 -0.0313 1.9416 N.am 1 LGD -0.6060
19 C13 1.8922 -0.3157 2.7276 C.3 1 LGD 0.0709
20 C14 2.7889 -1.3462 2.0148 C.2 1 LGD 0.6690
21 N7 3.9688 -0.8959 1.4325 N.am 1 LGD -0.6032
22 C15 4.8325 -1.7353 0.5819 C.3 1 LGD 0.0554
23 C16 6.1621 -2.0533 1.3013 C.2 1 LGD 0.6755
24 N8 -5.1544 -0.8121 4.0658 N.am 1 LGD -0.6191
25 O1 7.1130 -1.2905 1.2545 O.2 1 LGD -0.5614
26 O2 2.4982 -2.5294 1.9621 O.2 1 LGD -0.5959
27 O3 0.3740 1.9559 2.9445 O.2 1 LGD -0.5747
28 O4 -0.9950 4.2330 1.3444 O.2 1 LGD -0.5785
29 O5 -2.6188 6.2148 -2.2809 O.2 1 LGD -0.5816
30 O6 -5.0185 6.8256 0.4602 O.2 1 LGD -0.5946
31 O7 -4.1935 2.9570 2.7200 O.2 1 LGD -0.6142
32 C17 5.0668 -0.9913 -0.7625 C.3 1 LGD -0.0943
33 C18 5.9103 -1.8092 -1.7718 C.3 1 LGD -0.0751
34 C19 6.1059 -1.0670 -3.1144 C.3 1 LGD -0.1075
35 C20 4.8501 -1.1068 -4.0108 C.3 1 LGD 0.0938
36 N9 5.1157 -0.3050 -5.2217 N.4 1 LGD -0.7427
37 O8 -8.2075 1.0692 3.9601 O.2 1 LGD -0.5853
38 C21 -4.3539 -0.0900 4.9397 C.2 1 LGD 0.6627
39 C22 -2.8380 -0.2084 4.8093 C.3 1 LGD -0.1664
40 O9 -4.8664 0.6196 5.7875 O.2 1 LGD -0.5740
41 C23 1.5119 -0.7536 4.1777 C.3 1 LGD -0.0788
42 C24 -2.2809 0.2350 1.0570 C.3 1 LGD -0.0381
43 C25 0.6961 4.2957 -1.6354 C.3 1 LGD -0.0378
44 C26 -7.2458 2.9578 1.0171 C.3 1 LGD -0.0377
45 C27 -1.5063 8.9525 -0.3908 C.3 1 LGD 0.1249
46 C28 -3.9418 6.5059 3.7509 C.3 1 LGD -0.0352
47 C29 2.6001 -0.4194 5.2435 C.3 1 LGD -0.0659
48 C30 3.8838 -1.2735 5.0869 C.3 1 LGD -0.0914
49 C31 2.0251 -0.5801 6.6724 C.3 1 LGD -0.0914
50 C32 -1.9963 -0.6442 -0.1723 C.ar 1 LGD -0.0990
51 C33 -1.9427 -2.0432 -0.0218 C.ar 1 LGD -0.0932
52 C34 -1.8611 -2.8853 -1.1450 C.ar 1 LGD -0.1615
53 C35 -1.8122 -2.3493 -2.4428 C.ar 1 LGD 0.0584
54 C36 -1.8894 -0.9530 -2.5988 C.ar 1 LGD -0.1615
55 C37 -1.9812 -0.1150 -1.4779 C.ar 1 LGD -0.0932
56 N10 -1.7652 -3.2283 -3.5213 N.am 1 LGD -0.4962
57 C38 -1.1990 -2.9553 -4.7591 C.2 1 LGD 0.7948
58 N11 -1.3594 -3.8658 -5.7764 N.am 1 LGD -0.6939
59 O10 -0.5126 -1.9719 -4.9683 O.2 1 LGD -0.6829
60 C39 0.9992 2.8374 -1.9336 C.ar 1 LGD -0.1178
61 C40 1.6506 2.0526 -0.9710 C.ar 1 LGD -0.0978
62 C41 1.7988 0.6772 -1.1696 C.ar 1 LGD -0.1806
63 C42 1.3361 0.0633 -2.3518 C.ar 1 LGD 0.0565
64 C43 0.7442 0.8678 -3.3417 C.ar 1 LGD -0.1806
65 C44 0.5572 2.2422 -3.1268 C.ar 1 LGD -0.0978
66 N12 1.4744 -1.3025 -2.5893 N.am 1 LGD -0.5016
67 C45 1.5451 -2.2692 -1.5935 C.2 1 LGD 0.6514
68 O11 1.0934 -2.0320 -0.4878 O.2 1 LGD -0.5284
69 C46 2.1916 -3.6261 -1.9211 C.3 1 LGD 0.0607
70 C47 1.2424 -4.5638 -2.6970 C.3 1 LGD -0.1673
71 C48 1.8439 -5.9645 -2.8168 C.2 1 LGD 0.6966
72 N13 2.6079 -6.4580 -1.7792 N.am 1 LGD -0.6007
73 C49 2.9451 -5.6586 -0.7063 C.2 1 LGD 0.8234
74 N14 2.6430 -4.3102 -0.6993 N.am 1 LGD -0.6044
75 O12 3.5281 -6.1469 0.2410 O.2 1 LGD -0.6277
76 O13 1.6799 -6.6637 -3.7985 O.2 1 LGD -0.5881
77 O14 -0.3562 8.5786 0.3708 O.3 1 LGD -0.6226
78 C50 -2.5886 7.1958 3.8948 C.ar 1 LGD -0.2238
79 C51 -1.4011 6.4435 3.9443 C.ar 1 LGD -0.0804
80 C52 -0.1778 7.1238 4.0272 C.ar 1 LGD -0.2427
81 C53 -0.1834 8.5279 4.0628 C.ar 1 LGD 0.3956
82 N15 -1.3165 9.2567 4.0216 N.ar 1 LGD -0.6717
83 C54 -2.4921 8.6010 3.9421 C.ar 1 LGD 0.4060
84 C55 -6.2857 2.8163 -0.1648 C.ar 1 LGD -0.0895
85 C56 -5.9583 3.9367 -0.9524 C.ar 1 LGD -0.1128
86 C57 -5.0958 3.8059 -2.0528 C.ar 1 LGD -0.1204
87 C58 -4.5756 2.5475 -2.3892 C.ar 1 LGD 0.0172
88 C59 -4.9132 1.4235 -1.6209 C.ar 1 LGD -0.1204
89 C60 -5.7449 1.5637 -0.5013 C.ar 1 LGD -0.1128
90 Cl1 -3.5140 2.3804 -3.7727 Cl 1 LGD -0.1431
91 C61 -7.2383 -1.9488 3.3448 C.3 1 LGD -0.0419
92 C62 -6.8417 -2.0243 1.8732 C.ar 1 LGD -0.0987
93 C63 -7.6337 -1.4020 0.8903 C.ar 1 LGD -0.0999
94 C64 -7.2748 -1.4828 -0.4676 C.ar 1 LGD -0.0350
95 C65 -6.1171 -2.1941 -0.8475 C.ar 1 LGD -0.0320
96 C66 -5.3405 -2.8346 0.1317 C.ar 1 LGD -0.1233
97 C67 -5.6993 -2.7478 1.4850 C.ar 1 LGD -0.1374
98 C68 -8.0498 -0.8350 -1.4467 C.ar 1 LGD -0.1094
99 C69 -7.6694 -0.8937 -2.7971 C.ar 1 LGD -0.1207
100 C70 -6.5184 -1.6037 -3.1744 C.ar 1 LGD -0.1194
101 C71 -5.7440 -2.2561 -2.2020 C.ar 1 LGD -0.1321
102 C72 4.1712 -0.5836 -6.3236 C.3 1 LGD 0.1129
103 C73 4.6761 0.1560 -7.5806 C.3 1 LGD -0.1249
104 C74 2.7406 -0.1313 -5.9561 C.3 1 LGD -0.1249
105 N16 6.2727 -3.3211 1.8660 N.am 1 LGD -0.5245
106 C75 7.5321 -4.0794 1.8886 C.3 1 LGD 0.0562
107 C76 7.2983 -5.3083 2.7925 C.3 1 LGD -0.0878
108 C77 5.7724 -5.4391 2.9364 C.3 1 LGD -0.0956
109 C78 5.1902 -4.0810 2.5058 C.3 1 LGD 0.1002
110 C79 7.9102 -4.4782 0.4517 C.2 1 LGD 0.6518
111 O15 8.9940 -4.1846 -0.0233 O.2 1 LGD -0.5837
112 N17 6.9865 -5.1747 -0.3194 N.am 1 LGD -0.5909
113 C80 7.3310 -5.7424 -1.6345 C.3 1 LGD 0.0584
114 C81 8.0737 -7.0841 -1.4828 C.2 1 LGD 0.6433
115 N18 8.7043 -7.6304 -2.5801 N.am 1 LGD -0.6942
116 C82 6.0518 -5.9172 -2.4819 C.3 1 LGD -0.1004
117 O16 8.1365 -7.6968 -0.4314 O.2 1 LGD -0.5785
118 H1 -6.9504 -0.8138 5.1537 H 1 LGD 0.1080
119 H2 -5.5045 0.9036 2.3662 H 1 LGD 0.3209
120 H3 -7.2520 3.1771 3.1638 H 1 LGD 0.1013
121 H4 -6.1774 5.3611 2.2605 H 1 LGD 0.3278
122 H5 -3.1907 5.0938 2.3051 H 1 LGD 0.1140
123 H6 -2.1209 7.2985 1.5692 H 1 LGD 0.3373
124 H7 -3.4492 8.1861 -0.9584 H 1 LGD 0.1205
125 H8 -0.4400 6.3289 -0.0286 H 1 LGD 0.3391
126 H9 -1.4559 4.1000 -1.7805 H 1 LGD 0.1009
127 H10 -0.9772 1.8569 -0.7118 H 1 LGD 0.3190
128 H11 -1.9259 2.0584 2.0748 H 1 LGD 0.1263
129 H12 0.3514 -0.7001 1.2517 H 1 LGD 0.3385
130 H13 2.4745 0.6127 2.7916 H 1 LGD 0.0681
131 H14 4.2145 0.0764 1.5494 H 1 LGD 0.3279
132 H15 4.3383 -2.6817 0.3481 H 1 LGD 0.0807
133 H16 -4.7123 -1.4003 3.3750 H 1 LGD 0.3112
134 H17 4.1009 -0.7780 -1.2277 H 1 LGD 0.0534
135 H18 5.5489 -0.0229 -0.5741 H 1 LGD 0.0534
136 H19 6.8988 -2.0196 -1.3444 H 1 LGD 0.0735
137 H20 5.4315 -2.7786 -1.9505 H 1 LGD 0.0735
138 H21 6.3951 -0.0257 -2.9209 H 1 LGD 0.0648
139 H22 6.9398 -1.5303 -3.6571 H 1 LGD 0.0648
140 H23 4.6368 -2.1386 -4.2963 H 1 LGD 0.1058
141 H24 3.9870 -0.6949 -3.4840 H 1 LGD 0.1058
142 H25 6.0478 -0.5222 -5.5464 H 1 LGD 0.4489
143 H26 -2.4540 0.6107 4.1894 H 1 LGD 0.0631
144 H27 -2.3676 -0.1578 5.7991 H 1 LGD 0.0631
145 H28 -2.5671 -1.1632 4.3415 H 1 LGD 0.0631
146 H29 0.5903 -0.2360 4.4733 H 1 LGD 0.0622
147 H30 1.2689 -1.8236 4.2034 H 1 LGD 0.0622
148 H31 -2.3223 -0.3932 1.9542 H 1 LGD 0.0668
149 H32 -3.2995 0.6275 0.9451 H 1 LGD 0.0668
150 H33 0.7898 4.8906 -2.5530 H 1 LGD 0.0672
151 H34 1.4343 4.6991 -0.9297 H 1 LGD 0.0672
152 H35 -8.0780 2.2503 0.9077 H 1 LGD 0.0660
153 H36 -7.7038 3.9549 0.9976 H 1 LGD 0.0660
154 H37 -1.2076 9.2350 -1.4082 H 1 LGD 0.0455
155 H38 -1.9816 9.8271 0.0710 H 1 LGD 0.0455
156 H39 -4.7599 7.2333 3.8346 H 1 LGD 0.0679
157 H40 -4.0708 5.7992 4.5811 H 1 LGD 0.0679
158 H41 2.8815 0.6355 5.1262 H 1 LGD 0.0518
159 H42 4.4225 -1.0196 4.1671 H 1 LGD 0.0367
160 H43 4.5724 -1.0962 5.9229 H 1 LGD 0.0367
161 H44 3.6429 -2.3437 5.0675 H 1 LGD 0.0367
162 H45 1.1494 0.0658 6.8160 H 1 LGD 0.0367
163 H46 1.7206 -1.6177 6.8595 H 1 LGD 0.0367
164 H47 2.7718 -0.3008 7.4268 H 1 LGD 0.0367
165 H48 -1.9964 -2.4875 0.9680 H 1 LGD 0.1443
166 H49 -1.8368 -3.9618 -1.0019 H 1 LGD 0.1425
167 H50 -1.9297 -0.5033 -3.5856 H 1 LGD 0.1425
168 H51 -2.1035 0.9468 -1.6478 H 1 LGD 0.1443
169 H52 -2.0647 -4.1775 -3.3593 H 1 LGD 0.3228
170 H53 -1.9081 -4.6995 -5.6311 H 1 LGD 0.3321
171 H54 -0.9301 -3.6871 -6.6721 H 1 LGD 0.3321
172 H55 1.9932 2.4979 -0.0406 H 1 LGD 0.1540
173 H56 2.2772 0.1030 -0.3891 H 1 LGD 0.1492
174 H57 0.3835 0.4233 -4.2636 H 1 LGD 0.1492
175 H58 0.0490 2.8398 -3.8787 H 1 LGD 0.1540
176 H59 1.4082 -1.6236 -3.5442 H 1 LGD 0.3294
177 H60 3.0698 -3.4255 -2.5480 H 1 LGD 0.0357
178 H61 0.2888 -4.6509 -2.1625 H 1 LGD 0.0933
179 H62 1.0456 -4.1653 -3.6987 H 1 LGD 0.0933
180 H63 2.9225 -7.4151 -1.8027 H 1 LGD 0.3710
181 H64 2.7732 -3.7827 0.1544 H 1 LGD 0.3856
182 H65 0.2024 9.3709 0.4621 H 1 LGD 0.4237
183 H66 -1.4242 5.3571 3.9106 H 1 LGD 0.1639
184 H67 0.7585 6.5747 4.0611 H 1 LGD 0.1465
185 H68 0.7487 9.0875 4.1257 H 1 LGD 0.0199
186 H69 -3.3843 9.2242 3.8984 H 1 LGD 0.0252
187 H70 -6.3760 4.9107 -0.7167 H 1 LGD 0.1519
188 H71 -4.8457 4.6768 -2.6517 H 1 LGD 0.1550
189 H72 -4.5375 0.4422 -1.8906 H 1 LGD 0.1550
190 H73 -5.9777 0.6939 0.0992 H 1 LGD 0.1519
191 H74 -6.9406 -2.8745 3.8541 H 1 LGD 0.0712
192 H75 -8.3317 -1.9039 3.4319 H 1 LGD 0.0712
193 H76 -8.5216 -0.8480 1.1835 H 1 LGD 0.1480
194 H77 -4.4614 -3.4033 -0.1542 H 1 LGD 0.1291
195 H78 -5.0917 -3.2507 2.2322 H 1 LGD 0.1277
196 H79 -8.9385 -0.2784 -1.1624 H 1 LGD 0.1421
197 H80 -8.2661 -0.3878 -3.5508 H 1 LGD 0.1403
198 H81 -6.2264 -1.6479 -4.2198 H 1 LGD 0.1322
199 H82 -4.8537 -2.8021 -2.5010 H 1 LGD 0.1254
200 H83 4.1693 -1.6571 -6.5230 H 1 LGD 0.1056
201 H84 4.0223 -0.0458 -8.4385 H 1 LGD 0.0765
202 H85 4.7009 1.2411 -7.4166 H 1 LGD 0.0765
203 H86 5.6887 -0.1745 -7.8440 H 1 LGD 0.0765
204 H87 2.7276 0.9159 -5.6279 H 1 LGD 0.0765
205 H88 2.0680 -0.2294 -6.8176 H 1 LGD 0.0765
206 H89 2.3354 -0.7555 -5.1531 H 1 LGD 0.0765
207 H90 8.3364 -3.4559 2.3001 H 1 LGD 0.1073
208 H91 7.7486 -6.2206 2.3794 H 1 LGD 0.0750
209 H92 7.7452 -5.1270 3.7783 H 1 LGD 0.0750
210 H93 5.4031 -6.2314 2.2733 H 1 LGD 0.0681
211 H94 5.4832 -5.6907 3.9647 H 1 LGD 0.0681
212 H95 4.3630 -4.2384 1.8064 H 1 LGD 0.0556
213 H96 4.8315 -3.5264 3.3810 H 1 LGD 0.0556
214 H97 6.0861 -5.3894 0.0852 H 1 LGD 0.3319
215 H98 7.9984 -5.0531 -2.1677 H 1 LGD 0.0760
216 H99 8.6799 -7.1545 -3.4693 H 1 LGD 0.3165
217 H100 9.1864 -8.5119 -2.4850 H 1 LGD 0.3165
218 H101 6.3017 -6.2485 -3.4976 H 1 LGD 0.0404
219 H102 5.3917 -6.6688 -2.0330 H 1 LGD 0.0404
220 H103 5.4980 -4.9751 -2.5642 H 1 LGD 0.0404
221 H104 5.0842 0.6781 -4.9887 H 1 LGD 0.4489
@BOND
1 1 2 1
2 2 3 am
3 3 4 1
4 4 5 1
5 5 6 am
6 6 7 1
7 7 8 1
8 8 9 am
9 9 10 1
10 10 11 1
11 11 12 am
12 12 13 1
13 13 14 1
14 14 15 am
15 15 16 1
16 16 17 1
17 17 18 am
18 18 19 1
19 19 20 1
20 20 21 am
21 21 22 1
22 22 23 1
23 1 24 1
24 23 25 2
25 20 26 2
26 17 27 2
27 14 28 2
28 11 29 2
29 8 30 2
30 5 31 2
31 22 32 1
32 32 33 1
33 33 34 1
34 34 35 1
35 35 36 1
36 2 37 2
37 24 38 am
38 38 39 1
39 38 40 2
40 19 41 1
41 16 42 1
42 13 43 1
43 4 44 1
44 10 45 1
45 7 46 1
46 41 47 1
47 47 48 1
48 47 49 1
49 42 50 1
50 50 51 ar
51 51 52 ar
52 52 53 ar
53 53 54 ar
54 54 55 ar
55 50 55 ar
56 53 56 1
57 56 57 am
58 57 58 am
59 57 59 2
60 43 60 1
61 60 61 ar
62 61 62 ar
63 62 63 ar
64 63 64 ar
65 64 65 ar
66 60 65 ar
67 63 66 1
68 66 67 am
69 67 68 2
70 67 69 1
71 69 70 1
72 70 71 1
73 71 72 am
74 72 73 am
75 73 74 am
76 69 74 1
77 73 75 2
78 71 76 2
79 45 77 1
80 46 78 1
81 78 79 ar
82 79 80 ar
83 80 81 ar
84 81 82 ar
85 82 83 ar
86 78 83 ar
87 44 84 1
88 84 85 ar
89 85 86 ar
90 86 87 ar
91 87 88 ar
92 88 89 ar
93 84 89 ar
94 87 90 1
95 1 91 1
96 91 92 1
97 92 93 ar
98 93 94 ar
99 94 95 ar
100 95 96 ar
101 96 97 ar
102 92 97 ar
103 94 98 ar
104 98 99 ar
105 99 100 ar
106 100 101 ar
107 95 101 ar
108 36 102 1
109 102 103 1
110 102 104 1
111 23 105 am
112 105 106 1
113 106 107 1
114 107 108 1
115 108 109 1
116 105 109 1
117 106 110 1
118 110 111 2
119 110 112 am
120 112 113 1
121 113 114 1
122 114 115 am
123 113 116 1
124 114 117 2
125 1 118 1
126 3 119 1
127 4 120 1
128 6 121 1
129 7 122 1
130 9 123 1
131 10 124 1
132 12 125 1
133 13 126 1
134 15 127 1
135 16 128 1
136 18 129 1
137 19 130 1
138 21 131 1
139 22 132 1
140 24 133 1
141 32 134 1
142 32 135 1
143 33 136 1
144 33 137 1
145 34 138 1
146 34 139 1
147 35 140 1
148 35 141 1
149 36 142 1
150 39 143 1
151 39 144 1
152 39 145 1
153 41 146 1
154 41 147 1
155 42 148 1
156 42 149 1
157 43 150 1
158 43 151 1
159 44 152 1
160 44 153 1
161 45 154 1
162 45 155 1
163 46 156 1
164 46 157 1
165 47 158 1
166 48 159 1
167 48 160 1
168 48 161 1
169 49 162 1
170 49 163 1
171 49 164 1
172 51 165 1
173 52 166 1
174 54 167 1
175 55 168 1
176 56 169 1
177 58 170 1
178 58 171 1
179 61 172 1
180 62 173 1
181 64 174 1
182 65 175 1
183 66 176 1
184 69 177 1
185 70 178 1
186 70 179 1
187 72 180 1
188 74 181 1
189 77 182 1
190 79 183 1
191 80 184 1
192 81 185 1
193 83 186 1
194 85 187 1
195 86 188 1
196 88 189 1
197 89 190 1
198 91 191 1
199 91 192 1
200 93 193 1
201 96 194 1
202 97 195 1
203 98 196 1
204 99 197 1
205 100 198 1
206 101 199 1
207 102 200 1
208 103 201 1
209 103 202 1
210 103 203 1
211 104 204 1
212 104 205 1
213 104 206 1
214 106 207 1
215 107 208 1
216 107 209 1
217 108 210 1
218 108 211 1
219 109 212 1
220 109 213 1
221 112 214 1
222 113 215 1
223 115 216 1
224 115 217 1
225 116 218 1
226 116 219 1
227 116 220 1
228 36 221 1