@COMMENT
LIGANDBOX_ID = D09637-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09637
NAME = Lomitapide_(USAN/INN)
MOLECULAR_FORMULA = C39H37N3O2F6
MOLECULAR_WEIGHT = 693.732
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 2
NUM_OF_CHIRAL_ATOMS = 0
TPSA = 61.4400
HOMO = -11.3804
LUMO = -3.6469
mLOGS = -6.787
mLOGD = 4.420
mLOGPA = -4.586
@MOLECULE
D09637-01
88 93 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 21.7540 -35.7900 3.4030 C.ar 1 LGD -0.1078
2 C2 20.3550 -35.7940 3.4240 C.ar 1 LGD -0.0579
3 C3 19.8830 -37.0420 2.8150 C.ar 1 LGD -0.0579
4 C4 20.9940 -37.8030 2.4380 C.ar 1 LGD -0.1078
5 C5 22.3080 -37.0810 2.7800 C.3 1 LGD -0.0243
6 C6 18.5760 -37.4980 2.5610 C.ar 1 LGD -0.1193
7 C7 18.4110 -38.7420 1.9210 C.ar 1 LGD -0.1253
8 C8 19.5350 -39.5130 1.5550 C.ar 1 LGD -0.1173
9 C9 20.8400 -39.0470 1.8110 C.ar 1 LGD -0.1039
10 C10 22.4800 -34.6890 3.8790 C.ar 1 LGD -0.1039
11 C11 21.7690 -33.5960 4.4150 C.ar 1 LGD -0.1173
12 C12 20.3570 -33.6050 4.4560 C.ar 1 LGD -0.1253
13 C13 19.6370 -34.7050 3.9520 C.ar 1 LGD -0.1193
14 C14 23.0580 -36.7330 1.4780 C.2 1 LGD 0.6855
15 N1 22.3800 -35.9990 0.5140 N.am 1 LGD -0.5844
16 O1 24.2130 -37.0670 1.2750 O.2 1 LGD -0.5713
17 C15 23.0380 -35.4620 -0.6890 C.3 1 LGD 0.0527
18 C16 23.4860 -33.9950 -0.4770 C.3 1 LGD 0.6230
19 F1 24.0550 -33.5110 -1.6020 F 1 LGD -0.2296
20 F2 24.3890 -33.8970 0.5240 F 1 LGD -0.2296
21 F3 22.4300 -33.2080 -0.1710 F 1 LGD -0.2296
22 C17 23.1980 -37.9080 3.7670 C.3 1 LGD -0.0364
23 C18 22.5230 -38.2920 5.1180 C.3 1 LGD -0.0820
24 C19 22.8030 -37.2730 6.2550 C.3 1 LGD -0.1074
25 C20 22.2260 -37.7090 7.6260 C.3 1 LGD 0.1095
26 N2 20.7610 -37.9530 7.6250 N.4 1 LGD -0.6583
27 C21 20.3220 -38.5180 8.9240 C.3 1 LGD 0.1040
28 C22 18.8240 -38.8980 8.9160 C.3 1 LGD -0.1226
29 C23 17.9490 -37.6960 8.5030 C.3 1 LGD 0.1278
30 C24 18.4330 -37.1360 7.1450 C.3 1 LGD -0.1226
31 C25 19.9400 -36.7900 7.1920 C.3 1 LGD 0.1040
32 N3 16.5500 -38.1320 8.4210 N.am 1 LGD -0.6049
33 C26 15.4710 -37.2620 8.5080 C.2 1 LGD 0.6845
34 C27 14.0610 -37.8030 8.4170 C.ar 1 LGD -0.1324
35 O2 15.6790 -36.0720 8.6850 O.2 1 LGD -0.5852
36 C28 13.7330 -38.9720 7.6590 C.ar 1 LGD -0.0344
37 C29 12.4020 -39.4520 7.7000 C.ar 1 LGD -0.1155
38 C30 11.4130 -38.7920 8.4420 C.ar 1 LGD -0.0957
39 C31 11.7360 -37.6340 9.1600 C.ar 1 LGD -0.1210
40 C32 13.0500 -37.1450 9.1480 C.ar 1 LGD -0.0702
41 C33 14.7230 -39.6860 6.7980 C.ar 1 LGD -0.0218
42 C34 15.4190 -39.0040 5.7740 C.ar 1 LGD -0.1258
43 C35 16.3840 -39.6620 4.9990 C.ar 1 LGD -0.0903
44 C36 16.6730 -41.0230 5.2140 C.ar 1 LGD -0.1943
45 C37 15.9600 -41.7210 6.2110 C.ar 1 LGD -0.0903
46 C38 14.9960 -41.0600 6.9910 C.ar 1 LGD -0.1258
47 C39 17.7460 -41.7060 4.3610 C.3 1 LGD 0.7083
48 F4 17.3840 -41.7580 3.0610 F 1 LGD -0.2308
49 F5 17.9990 -42.9760 4.7480 F 1 LGD -0.2308
50 F6 18.9200 -41.0410 4.4190 F 1 LGD -0.2308
51 H1 17.7140 -36.9000 2.8430 H 1 LGD 0.1408
52 H2 17.4120 -39.1120 1.7100 H 1 LGD 0.1472
53 H3 19.3930 -40.4740 1.0670 H 1 LGD 0.1514
54 H4 21.7050 -39.6350 1.5190 H 1 LGD 0.1530
55 H5 23.5660 -34.6810 3.8440 H 1 LGD 0.1530
56 H6 22.3130 -32.7370 4.7980 H 1 LGD 0.1492
57 H7 19.8240 -32.7550 4.8710 H 1 LGD 0.1472
58 H8 18.5510 -34.7110 3.9690 H 1 LGD 0.1408
59 H9 21.4170 -35.7520 0.6900 H 1 LGD 0.3316
60 H10 23.9080 -36.0720 -0.9640 H 1 LGD 0.0985
61 H11 22.3320 -35.4990 -1.5270 H 1 LGD 0.0985
62 H12 24.1300 -37.3620 3.9670 H 1 LGD 0.0729
63 H13 23.4970 -38.8350 3.2620 H 1 LGD 0.0729
64 H14 21.4430 -38.4270 4.9860 H 1 LGD 0.0438
65 H15 22.9140 -39.2680 5.4330 H 1 LGD 0.0438
66 H16 23.8880 -37.1500 6.3660 H 1 LGD 0.0834
67 H17 22.4140 -36.2840 5.9950 H 1 LGD 0.0834
68 H18 22.7440 -38.6270 7.9330 H 1 LGD 0.0969
69 H19 22.4680 -36.9360 8.3680 H 1 LGD 0.0969
70 H20 20.9100 -39.4140 9.1600 H 1 LGD 0.1060
71 H21 20.4960 -37.7840 9.7230 H 1 LGD 0.1060
72 H22 18.6670 -39.7300 8.2160 H 1 LGD 0.0878
73 H23 18.5280 -39.2530 9.9110 H 1 LGD 0.0878
74 H24 18.0480 -36.9130 9.2670 H 1 LGD 0.0884
75 H25 18.2610 -37.8770 6.3540 H 1 LGD 0.0878
76 H26 17.8580 -36.2400 6.8770 H 1 LGD 0.0878
77 H27 20.2390 -36.4620 6.1900 H 1 LGD 0.1060
78 H28 20.0940 -35.9500 7.8810 H 1 LGD 0.1060
79 H29 16.3600 -39.1130 8.2770 H 1 LGD 0.3261
80 H30 12.1330 -40.3380 7.1320 H 1 LGD 0.1467
81 H31 10.3960 -39.1740 8.4550 H 1 LGD 0.1517
82 H32 10.9700 -37.1200 9.7340 H 1 LGD 0.1529
83 H33 13.2880 -36.2580 9.7290 H 1 LGD 0.1603
84 H34 15.2200 -37.9510 5.5960 H 1 LGD 0.1536
85 H35 16.9160 -39.1080 4.2330 H 1 LGD 0.1536
86 H36 16.1520 -42.7740 6.3950 H 1 LGD 0.1536
87 H37 14.4680 -41.6100 7.7650 H 1 LGD 0.1536
88 H38 20.5730 -38.8038 7.1344 H 1 LGD 0.4409
@BOND
1 1 2 ar
2 2 3 1
3 3 4 ar
4 4 5 1
5 1 5 1
6 3 6 ar
7 6 7 ar
8 7 8 ar
9 8 9 ar
10 4 9 ar
11 1 10 ar
12 10 11 ar
13 11 12 ar
14 12 13 ar
15 2 13 ar
16 5 14 1
17 14 15 am
18 14 16 2
19 15 17 1
20 17 18 1
21 18 19 1
22 18 20 1
23 18 21 1
24 22 23 1
25 5 22 1
26 23 24 1
27 24 25 1
28 25 26 1
29 26 27 1
30 27 28 1
31 28 29 1
32 29 30 1
33 30 31 1
34 26 31 1
35 29 32 1
36 32 33 am
37 33 34 1
38 33 35 2
39 34 36 ar
40 36 37 ar
41 37 38 ar
42 38 39 ar
43 39 40 ar
44 34 40 ar
45 36 41 1
46 41 42 ar
47 42 43 ar
48 43 44 ar
49 44 45 ar
50 45 46 ar
51 41 46 ar
52 44 47 1
53 47 48 1
54 47 49 1
55 47 50 1
56 6 51 1
57 7 52 1
58 8 53 1
59 9 54 1
60 10 55 1
61 11 56 1
62 12 57 1
63 13 58 1
64 15 59 1
65 17 60 1
66 17 61 1
67 22 62 1
68 22 63 1
69 23 64 1
70 23 65 1
71 24 66 1
72 24 67 1
73 25 68 1
74 25 69 1
75 27 70 1
76 27 71 1
77 28 72 1
78 28 73 1
79 29 74 1
80 30 75 1
81 30 76 1
82 31 77 1
83 31 78 1
84 32 79 1
85 37 80 1
86 38 81 1
87 39 82 1
88 40 83 1
89 42 84 1
90 43 85 1
91 45 86 1
92 46 87 1
93 26 88 1