@COMMENT
LIGANDBOX_ID = D09881-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09881
NAME = Cobicistat_(JAN/USAN/INN)_Tybost_(TN)_ABBR______COBI
MOLECULAR_FORMULA = C40H53N7O5S2
MOLECULAR_WEIGHT = 776.038
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 138.0200
HOMO = -10.6353
LUMO = -3.7066
mLOGPA = -5.576
mLOGS = -4.061
mLOGD = 2.236
@MOLECULE
D09881-01
108 112 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.3550 -1.5550 0.6930 C.3 1 LGD 0.1375
2 C2 2.7650 -2.2160 0.6490 C.3 1 LGD -0.0547
3 C3 1.2390 -0.4710 1.8150 C.3 1 LGD -0.0857
4 N1 0.9750 -1.0520 -0.6410 N.am 1 LGD -0.5870
5 C4 -0.2060 0.0600 2.0300 C.3 1 LGD -0.0968
6 C5 1.7090 -0.1240 -1.3720 C.2 1 LGD 0.6651
7 C6 -0.6060 1.1950 1.0430 C.3 1 LGD 0.1317
8 C7 1.3120 0.0940 -2.8360 C.3 1 LGD 0.0746
9 O1 2.6230 0.4940 -0.8510 O.2 1 LGD -0.5877
10 C8 -0.3840 2.6180 1.6040 C.3 1 LGD -0.0346
11 N2 -2.0160 1.0170 0.6650 N.am 1 LGD -0.5705
12 N3 1.7250 1.4330 -3.2870 N.am 1 LGD -0.6071
13 C9 -0.5480 3.6610 0.5040 C.ar 1 LGD -0.0778
14 C10 -2.3850 0.7610 -0.6430 C.2 1 LGD 0.7441
15 C11 0.9320 2.2340 -4.0960 C.2 1 LGD 0.8017
16 C12 0.4720 3.8450 -0.4500 C.ar 1 LGD -0.1150
17 C13 -1.7350 4.4110 0.4010 C.ar 1 LGD -0.1150
18 O2 -3.5550 0.0860 -0.8380 O.3 1 LGD -0.4354
19 O3 -1.6530 1.0990 -1.5580 O.2 1 LGD -0.5708
20 N4 1.4860 3.3910 -4.6380 N.am 1 LGD -0.5081
21 O4 -0.2160 1.8930 -4.3290 O.2 1 LGD -0.6115
22 C14 0.3090 4.7730 -1.4900 C.ar 1 LGD -0.1270
23 C15 -1.8980 5.3350 -0.6430 C.ar 1 LGD -0.1270
24 C16 -3.7900 -0.5470 -2.1140 C.3 1 LGD 0.2426
25 C17 0.7430 4.2140 -5.6160 C.3 1 LGD 0.0944
26 C18 2.8930 3.7710 -4.4040 C.3 1 LGD 0.0882
27 C19 -0.8770 5.5160 -1.5890 C.ar 1 LGD -0.1256
28 C20 -2.7690 -1.6420 -2.3190 C.ar 1 LGD -0.1268
29 C21 0.9610 3.7450 -7.0360 C.ar 1 LGD 0.3192
30 C22 -2.3240 -2.4730 -1.3270 C.ar 1 LGD 0.3388
31 S1 -1.8880 -1.9830 -3.8000 S.3 1 LGD -0.2458
32 N5 0.8970 2.4270 -7.3720 N.ar 1 LGD -0.6436
33 C23 1.2290 4.6470 -8.0300 C.ar 1 LGD -0.1544
34 N6 -1.3490 -3.3570 -1.6740 N.ar 1 LGD -0.6307
35 C24 -0.9990 -3.2480 -2.9410 C.ar 1 LGD 0.4058
36 C25 1.1110 2.2390 -8.6580 C.ar 1 LGD 0.4333
37 S2 1.4180 3.7460 -9.5320 S.3 1 LGD -0.1994
38 C26 1.1520 0.8800 -9.3200 C.3 1 LGD -0.0914
39 C27 -0.0030 -0.0360 -8.8410 C.3 1 LGD -0.0844
40 C28 2.5250 0.2060 -9.0950 C.3 1 LGD -0.0844
41 C29 2.9980 -3.0650 -0.6040 C.ar 1 LGD -0.0669
42 C30 4.0990 -2.7980 -1.4410 C.ar 1 LGD -0.1192
43 C31 4.2990 -3.5460 -2.6120 C.ar 1 LGD -0.1483
44 C32 3.3980 -4.5630 -2.9590 C.ar 1 LGD -0.1630
45 C33 2.3000 -4.8380 -2.1290 C.ar 1 LGD -0.1483
46 C34 2.1030 -4.0950 -0.9530 C.ar 1 LGD -0.1192
47 C35 1.9420 -1.0010 -3.7330 C.3 1 LGD -0.1143
48 C36 1.5470 -0.8550 -5.2300 C.3 1 LGD 0.1091
49 N7 2.0050 -1.9760 -6.0840 N.4 1 LGD -0.6671
50 C37 3.4750 -2.1460 -6.1610 C.3 1 LGD 0.0564
51 C38 3.8520 -3.2280 -7.2020 C.3 1 LGD 0.1141
52 O5 3.1490 -4.4420 -6.8630 O.3 1 LGD -0.3844
53 C39 1.7140 -4.3080 -6.9230 C.3 1 LGD 0.1141
54 C40 1.2850 -3.2530 -5.8750 C.3 1 LGD 0.0564
55 H1 0.6420 -2.3520 0.9410 H 1 LGD 0.0569
56 H2 3.5330 -1.4360 0.7200 H 1 LGD 0.0698
57 H3 2.8920 -2.8400 1.5420 H 1 LGD 0.0698
58 H4 1.5730 -0.9240 2.7560 H 1 LGD 0.0631
59 H5 1.9220 0.3660 1.6260 H 1 LGD 0.0631
60 H6 0.1880 -1.4900 -1.0980 H 1 LGD 0.3137
61 H7 -0.9020 -0.7840 1.9390 H 1 LGD 0.0484
62 H8 -0.3110 0.4230 3.0610 H 1 LGD 0.0484
63 H9 0.0220 1.1100 0.1530 H 1 LGD 0.0869
64 H10 0.2210 -0.0050 -2.8860 H 1 LGD 0.1200
65 H11 -1.0800 2.8080 2.4310 H 1 LGD 0.0555
66 H12 0.6270 2.6880 2.0250 H 1 LGD 0.0555
67 H13 -2.6920 0.8280 1.3900 H 1 LGD 0.3184
68 H14 2.6500 1.7570 -3.0490 H 1 LGD 0.3262
69 H15 1.3870 3.2620 -0.3890 H 1 LGD 0.1304
70 H16 -2.5350 4.2680 1.1210 H 1 LGD 0.1304
71 H17 1.0980 4.9130 -2.2210 H 1 LGD 0.1266
72 H18 -2.8180 5.9080 -0.7220 H 1 LGD 0.1266
73 H19 -4.7970 -0.9830 -2.1300 H 1 LGD 0.0898
74 H20 -3.7220 0.1900 -2.9250 H 1 LGD 0.0898
75 H21 -0.3290 4.1740 -5.3860 H 1 LGD 0.0804
76 H22 1.0540 5.2620 -5.5170 H 1 LGD 0.0804
77 H23 3.0780 3.8620 -3.3260 H 1 LGD 0.0415
78 H24 3.5530 3.0000 -4.8220 H 1 LGD 0.0415
79 H25 3.1180 4.7300 -4.8850 H 1 LGD 0.0415
80 H26 -1.0050 6.2300 -2.3990 H 1 LGD 0.1261
81 H27 -2.6770 -2.4690 -0.3040 H 1 LGD 0.0635
82 H28 1.3250 5.7230 -7.9930 H 1 LGD 0.1932
83 H29 -0.2530 -3.8510 -3.4400 H 1 LGD 0.0392
84 H30 1.0270 1.0200 -10.4010 H 1 LGD 0.0755
85 H31 0.0790 -0.2530 -7.7690 H 1 LGD 0.0344
86 H32 -0.9740 0.4420 -9.0200 H 1 LGD 0.0344
87 H33 0.0090 -0.9910 -9.3830 H 1 LGD 0.0344
88 H34 3.3280 0.8110 -9.5350 H 1 LGD 0.0344
89 H35 2.7330 0.0950 -8.0250 H 1 LGD 0.0344
90 H36 2.5560 -0.7890 -9.5580 H 1 LGD 0.0344
91 H37 4.7950 -2.0030 -1.1900 H 1 LGD 0.1477
92 H38 5.1500 -3.3320 -3.2530 H 1 LGD 0.1308
93 H39 3.5490 -5.1360 -3.8700 H 1 LGD 0.1305
94 H40 1.6010 -5.6260 -2.3960 H 1 LGD 0.1308
95 H41 1.2480 -4.3150 -0.3200 H 1 LGD 0.1477
96 H42 3.0330 -0.9570 -3.6330 H 1 LGD 0.0658
97 H43 1.6280 -1.9820 -3.3580 H 1 LGD 0.0658
98 H44 0.4550 -0.7690 -5.3020 H 1 LGD 0.1215
99 H45 1.9670 0.0820 -5.6170 H 1 LGD 0.1215
100 H46 3.9510 -1.1980 -6.4380 H 1 LGD 0.1127
101 H47 3.8700 -2.4510 -5.1850 H 1 LGD 0.1127
102 H48 3.5720 -2.8940 -8.2090 H 1 LGD 0.0910
103 H49 4.9350 -3.4030 -7.1800 H 1 LGD 0.0910
104 H50 1.4020 -3.9890 -7.9260 H 1 LGD 0.0910
105 H51 1.2380 -5.2700 -6.6970 H 1 LGD 0.0910
106 H52 0.2020 -3.0910 -5.9510 H 1 LGD 0.1127
107 H53 1.5020 -3.6490 -4.8760 H 1 LGD 0.1127
108 H54 2.1111 -1.6479 -7.0227 H 1 LGD 0.4464
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 3 5 1
5 4 6 am
6 5 7 1
7 6 8 1
8 6 9 2
9 7 10 1
10 7 11 1
11 8 12 1
12 10 13 1
13 11 14 am
14 12 15 am
15 13 16 ar
16 13 17 ar
17 14 18 1
18 14 19 2
19 15 20 am
20 15 21 2
21 16 22 ar
22 17 23 ar
23 18 24 1
24 20 25 1
25 20 26 1
26 22 27 ar
27 24 28 1
28 25 29 1
29 28 30 2
30 28 31 1
31 29 32 1
32 29 33 2
33 30 34 1
34 31 35 1
35 32 36 2
36 33 37 1
37 36 38 1
38 38 39 1
39 38 40 1
40 23 27 ar
41 34 35 2
42 36 37 1
43 2 41 1
44 41 42 ar
45 42 43 ar
46 43 44 ar
47 44 45 ar
48 45 46 ar
49 41 46 ar
50 8 47 1
51 47 48 1
52 48 49 1
53 49 50 1
54 50 51 1
55 51 52 1
56 52 53 1
57 53 54 1
58 49 54 1
59 1 55 1
60 2 56 1
61 2 57 1
62 3 58 1
63 3 59 1
64 4 60 1
65 5 61 1
66 5 62 1
67 7 63 1
68 8 64 1
69 10 65 1
70 10 66 1
71 11 67 1
72 12 68 1
73 16 69 1
74 17 70 1
75 22 71 1
76 23 72 1
77 24 73 1
78 24 74 1
79 25 75 1
80 25 76 1
81 26 77 1
82 26 78 1
83 26 79 1
84 27 80 1
85 30 81 1
86 33 82 1
87 35 83 1
88 38 84 1
89 39 85 1
90 39 86 1
91 39 87 1
92 40 88 1
93 40 89 1
94 40 90 1
95 42 91 1
96 43 92 1
97 44 93 1
98 45 94 1
99 46 95 1
100 47 96 1
101 47 97 1
102 48 98 1
103 48 99 1
104 50 100 1
105 50 101 1
106 51 102 1
107 51 103 1
108 53 104 1
109 53 105 1
110 54 106 1
111 54 107 1
112 49 108 1