@COMMENT
LIGANDBOX_ID = D09881-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09881
NAME = Cobicistat_(JAN/USAN/INN)_Tybost_(TN)_ABBR______COBI
MOLECULAR_FORMULA = C40H53N7O5S2
MOLECULAR_WEIGHT = 776.038
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 138.0200
HOMO = -10.6353
LUMO = -3.7066
mLOGPA = -5.576
mLOGS = -4.061
mLOGD = 2.236
@MOLECULE
D09881-02
108 112 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 0.8003 -1.5193 3.4595 C.3 1 LGD 0.1338
2 C2 0.0155 -2.8246 3.7755 C.3 1 LGD -0.0428
3 C3 0.6083 -0.3858 4.5269 C.3 1 LGD -0.0864
4 N1 0.4138 -1.0888 2.1065 N.am 1 LGD -0.5884
5 C4 -0.8498 0.1144 4.7269 C.3 1 LGD -0.0979
6 C5 1.1812 -0.2312 1.3311 C.2 1 LGD 0.6559
7 C6 -1.2474 1.2209 3.7133 C.3 1 LGD 0.1311
8 C7 0.7301 0.0289 -0.1141 C.3 1 LGD 0.0762
9 O1 2.1734 0.2976 1.8050 O.2 1 LGD -0.5871
10 C8 -1.0443 2.6511 4.2636 C.3 1 LGD -0.0370
11 N2 -2.6503 1.0217 3.3225 N.am 1 LGD -0.5695
12 N3 1.1282 1.3779 -0.5535 N.am 1 LGD -0.6082
13 C9 -1.2027 3.6884 3.1592 C.ar 1 LGD -0.0760
14 C10 -3.0025 0.7417 2.0150 C.2 1 LGD 0.7442
15 C11 0.3380 2.1646 -1.3802 C.2 1 LGD 0.8020
16 C12 -0.1783 3.8678 2.2102 C.ar 1 LGD -0.1158
17 C13 -2.3827 4.4479 3.0566 C.ar 1 LGD -0.1158
18 O2 -4.1763 0.0763 1.8113 O.3 1 LGD -0.4346
19 O3 -2.2508 1.0560 1.1073 O.2 1 LGD -0.5770
20 N4 0.8760 3.3363 -1.9063 N.am 1 LGD -0.5076
21 O4 -0.7936 1.7949 -1.6460 O.2 1 LGD -0.6148
22 C14 -0.3309 4.8016 1.1733 C.ar 1 LGD -0.1269
23 C15 -2.5360 5.3783 2.0163 C.ar 1 LGD -0.1269
24 C16 -4.4233 -0.5321 0.5263 C.3 1 LGD 0.2426
25 C17 0.1283 4.1572 -2.8840 C.3 1 LGD 0.0949
26 C18 2.2710 3.7436 -1.6504 C.3 1 LGD 0.0875
27 C19 -1.5103 5.5554 1.0745 C.ar 1 LGD -0.1271
28 C20 -3.4136 -1.6322 0.2947 C.ar 1 LGD -0.1233
29 C21 0.3416 3.6902 -4.3059 C.ar 1 LGD 0.3198
30 C22 -3.0159 -2.5218 1.2545 C.ar 1 LGD 0.3399
31 S1 -2.4872 -1.9074 -1.1740 S.3 1 LGD -0.2501
32 N5 0.3043 2.3696 -4.6383 N.ar 1 LGD -0.6458
33 C23 0.5749 4.5961 -5.3040 C.ar 1 LGD -0.1532
34 N6 -2.0424 -3.4021 0.8915 N.ar 1 LGD -0.6243
35 C24 -1.6522 -3.2356 -0.3564 C.ar 1 LGD 0.4030
36 C25 0.5004 2.1853 -5.9274 C.ar 1 LGD 0.4312
37 S2 0.7647 3.6969 -6.8077 S.3 1 LGD -0.1954
38 C26 0.5514 0.8258 -6.5861 C.3 1 LGD -0.0927
39 C27 -0.6028 -0.0925 -6.1112 C.3 1 LGD -0.0871
40 C28 1.9261 0.1593 -6.3532 C.3 1 LGD -0.0871
41 C29 0.1734 -3.3056 5.2149 C.ar 1 LGD -0.0860
42 C30 -0.9617 -3.4720 6.0315 C.ar 1 LGD -0.1270
43 C31 -0.8209 -3.8873 7.3651 C.ar 1 LGD -0.1227
44 C32 0.4553 -4.1398 7.8910 C.ar 1 LGD -0.1225
45 C33 1.5903 -3.9841 7.0802 C.ar 1 LGD -0.1227
46 C34 1.4502 -3.5725 5.7450 C.ar 1 LGD -0.1270
47 C35 1.3186 -1.0393 -1.0672 C.3 1 LGD -0.1131
48 C36 0.8777 -0.8166 -2.5422 C.3 1 LGD 0.0980
49 N7 1.3203 -1.8840 -3.4734 N.4 1 LGD -0.6650
50 C37 2.7933 -2.0717 -3.4519 C.3 1 LGD 0.0646
51 C38 3.1960 -3.1462 -4.4894 C.3 1 LGD 0.1132
52 O5 2.4878 -4.3583 -4.1660 O.3 1 LGD -0.3845
53 C39 1.0549 -4.2252 -4.2342 C.3 1 LGD 0.1132
54 C40 0.6278 -3.1650 -3.1921 C.3 1 LGD 0.0646
55 H1 1.8679 -1.7738 3.4440 H 1 LGD 0.0643
56 H2 -1.0470 -2.6750 3.5477 H 1 LGD 0.0519
57 H3 0.3544 -3.6141 3.0924 H 1 LGD 0.0519
58 H4 0.9790 -0.7515 5.4924 H 1 LGD 0.0636
59 H5 1.2546 0.4662 4.2819 H 1 LGD 0.0636
60 H6 -0.4238 -1.4801 1.6999 H 1 LGD 0.3137
61 H7 -1.5435 -0.7321 4.6604 H 1 LGD 0.0497
62 H8 -0.9598 0.5020 5.7481 H 1 LGD 0.0497
63 H9 -0.6042 1.1228 2.8335 H 1 LGD 0.0842
64 H10 -0.3621 -0.0627 -0.1262 H 1 LGD 0.1194
65 H11 -1.7500 2.8405 5.0830 H 1 LGD 0.0562
66 H12 -0.0389 2.7334 4.6964 H 1 LGD 0.0562
67 H13 -3.3345 0.8535 4.0445 H 1 LGD 0.3194
68 H14 2.0393 1.7226 -0.2901 H 1 LGD 0.3283
69 H15 0.7337 3.2803 2.2743 H 1 LGD 0.1294
70 H16 -3.1844 4.3111 3.7769 H 1 LGD 0.1294
71 H17 0.4634 4.9416 0.4473 H 1 LGD 0.1266
72 H18 -3.4501 5.9599 1.9394 H 1 LGD 0.1266
73 H19 -5.4343 -0.9577 0.5088 H 1 LGD 0.0894
74 H20 -4.3533 0.2192 -0.2709 H 1 LGD 0.0894
75 H21 -0.9428 4.1156 -2.6490 H 1 LGD 0.0804
76 H22 0.4379 5.2058 -2.7873 H 1 LGD 0.0804
77 H23 2.4372 3.8362 -0.5699 H 1 LGD 0.0423
78 H24 2.9530 2.9875 -2.0595 H 1 LGD 0.0423
79 H25 2.4841 4.7088 -2.1273 H 1 LGD 0.0423
80 H26 -1.6292 6.2752 0.2699 H 1 LGD 0.1261
81 H27 -3.4003 -2.5661 2.2655 H 1 LGD 0.0638
82 H28 0.6453 5.6754 -5.2705 H 1 LGD 0.1941
83 H29 -0.8972 -3.8220 -0.8621 H 1 LGD 0.0359
84 H30 0.4313 0.9641 -7.6685 H 1 LGD 0.0771
85 H31 -0.5311 -0.3010 -5.0368 H 1 LGD 0.0351
86 H32 -1.5743 0.3814 -6.3017 H 1 LGD 0.0351
87 H33 -0.5836 -1.0502 -6.6463 H 1 LGD 0.0351
88 H34 2.7268 0.7650 -6.7962 H 1 LGD 0.0351
89 H35 2.1338 0.0581 -5.2817 H 1 LGD 0.0351
90 H36 1.9619 -0.8376 -6.8103 H 1 LGD 0.0351
91 H37 -1.9543 -3.2739 5.6367 H 1 LGD 0.1283
92 H38 -1.7004 -4.0098 7.9909 H 1 LGD 0.1375
93 H39 0.5642 -4.4562 8.9244 H 1 LGD 0.1389
94 H40 2.5783 -4.1796 7.4868 H 1 LGD 0.1375
95 H41 2.3349 -3.4528 5.1263 H 1 LGD 0.1283
96 H42 2.4130 -1.0103 -0.9953 H 1 LGD 0.0601
97 H43 1.0013 -2.0304 -0.7226 H 1 LGD 0.0601
98 H44 -0.2113 -0.7490 -2.5849 H 1 LGD 0.1238
99 H45 1.2834 0.1348 -2.8925 H 1 LGD 0.1238
100 H46 3.2855 -1.1254 -3.6830 H 1 LGD 0.1102
101 H47 3.1009 -2.3984 -2.4571 H 1 LGD 0.1102
102 H48 2.9408 -2.8119 -5.5029 H 1 LGD 0.0914
103 H49 4.2780 -3.3209 -4.4399 H 1 LGD 0.0914
104 H50 0.7462 -3.9151 -5.2407 H 1 LGD 0.0914
105 H51 0.5789 -5.1857 -4.0011 H 1 LGD 0.0914
106 H52 -0.4521 -3.0122 -3.2350 H 1 LGD 0.1102
107 H53 0.8994 -3.5102 -2.1934 H 1 LGD 0.1102
108 H54 1.0603 -1.5961 -4.4077 H 1 LGD 0.4507
@BOND
1 1 2 1
2 1 3 1
3 1 4 1
4 3 5 1
5 4 6 am
6 5 7 1
7 6 8 1
8 6 9 2
9 7 10 1
10 7 11 1
11 8 12 1
12 10 13 1
13 11 14 am
14 12 15 am
15 13 16 ar
16 13 17 ar
17 14 18 1
18 14 19 2
19 15 20 am
20 15 21 2
21 16 22 ar
22 17 23 ar
23 18 24 1
24 20 25 1
25 20 26 1
26 22 27 ar
27 24 28 1
28 25 29 1
29 28 30 2
30 28 31 1
31 29 32 1
32 29 33 2
33 30 34 1
34 31 35 1
35 32 36 2
36 33 37 1
37 36 38 1
38 38 39 1
39 38 40 1
40 23 27 ar
41 34 35 2
42 36 37 1
43 2 41 1
44 41 42 ar
45 42 43 ar
46 43 44 ar
47 44 45 ar
48 45 46 ar
49 41 46 ar
50 8 47 1
51 47 48 1
52 48 49 1
53 49 50 1
54 50 51 1
55 51 52 1
56 52 53 1
57 53 54 1
58 49 54 1
59 1 55 1
60 2 56 1
61 2 57 1
62 3 58 1
63 3 59 1
64 4 60 1
65 5 61 1
66 5 62 1
67 7 63 1
68 8 64 1
69 10 65 1
70 10 66 1
71 11 67 1
72 12 68 1
73 16 69 1
74 17 70 1
75 22 71 1
76 23 72 1
77 24 73 1
78 24 74 1
79 25 75 1
80 25 76 1
81 26 77 1
82 26 78 1
83 26 79 1
84 27 80 1
85 30 81 1
86 33 82 1
87 35 83 1
88 38 84 1
89 39 85 1
90 39 86 1
91 39 87 1
92 40 88 1
93 40 89 1
94 40 90 1
95 42 91 1
96 43 92 1
97 44 93 1
98 45 94 1
99 46 95 1
100 47 96 1
101 47 97 1
102 48 98 1
103 48 99 1
104 50 100 1
105 50 101 1
106 51 102 1
107 51 103 1
108 53 104 1
109 53 105 1
110 54 106 1
111 54 107 1
112 49 108 1