@COMMENT
LIGANDBOX_ID = D09934-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09934
NAME = Naronapride_dihydrochloride_(USAN)
MOLECULAR_FORMULA = C27H41N4O5Cl
MOLECULAR_WEIGHT = 537.101
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 106.3600
HOMO = -12.1276
LUMO = -6.2492
mLOGS = -2.585
mLOGD = 1.133
mLOGPA = -3.854
@MOLECULE
D09934-02
80 83 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.0073 -4.5128 5.3723 C.ar 1 LGD 0.2710
2 C2 -1.3684 -4.7839 5.1614 C.ar 1 LGD -0.0891
3 C3 -2.1246 -3.9576 4.3184 C.ar 1 LGD 0.0234
4 C4 -1.5429 -2.8460 3.6691 C.ar 1 LGD -0.2307
5 C5 -0.1634 -2.5749 3.8867 C.ar 1 LGD 0.2093
6 C6 0.5899 -3.4156 4.7374 C.ar 1 LGD -0.3024
7 O1 0.4344 -1.4881 3.2717 O.3 1 LGD -0.4040
8 C7 1.8180 -1.1342 3.4335 C.3 1 LGD 0.1471
9 N1 0.7513 -5.3104 6.1950 N.pl3 1 LGD -0.8470
10 Cl1 -2.1484 -6.1552 5.9370 Cl 1 LGD -0.0674
11 C8 -2.4259 -2.0149 2.7551 C.2 1 LGD 0.6987
12 N2 -1.8886 -0.9731 2.0123 N.am 1 LGD -0.6140
13 O2 -3.6143 -2.2624 2.6369 O.2 1 LGD -0.5655
14 C9 -2.6231 -0.2485 0.9668 C.3 1 LGD 0.1008
15 C10 -2.1329 -0.6669 -0.4488 C.3 1 LGD 0.1173
16 C11 -2.7409 0.2484 -1.5314 C.3 1 LGD 0.0976
17 N3 -2.4080 1.6694 -1.2656 N.4 1 LGD -0.6658
18 C12 -2.9935 2.0969 0.0260 C.3 1 LGD 0.1005
19 C13 -2.3995 1.2667 1.1849 C.3 1 LGD -0.1180
20 O3 -2.5587 -2.0096 -0.7603 O.3 1 LGD -0.3896
21 C14 -1.6249 -3.0633 -0.4549 C.3 1 LGD 0.1240
22 C15 -2.9625 2.5414 -2.3255 C.3 1 LGD 0.1025
23 C16 -2.2071 2.3792 -3.6672 C.3 1 LGD -0.1157
24 C17 -0.7354 2.8457 -3.5792 C.3 1 LGD -0.0849
25 C18 0.0235 2.6001 -4.9086 C.3 1 LGD -0.0703
26 C19 1.4527 3.2011 -4.9347 C.3 1 LGD -0.1244
27 C20 2.4812 2.3771 -4.1536 C.2 1 LGD 0.6358
28 O4 2.3339 2.5280 -2.8022 O.3 1 LGD -0.4638
29 O5 3.3510 1.7096 -4.6874 O.2 1 LGD -0.4738
30 C21 3.2413 1.8773 -1.8872 C.3 1 LGD 0.1465
31 C22 2.9940 0.3365 -1.8565 C.3 1 LGD -0.0917
32 C23 1.5514 0.0630 -1.3532 C.3 1 LGD -0.0967
33 C24 3.9589 -0.2469 -0.7924 C.3 1 LGD -0.0967
34 N4 2.5806 1.4142 0.4923 N.4 1 LGD -0.6666
35 C25 2.9872 2.4783 -0.4693 C.3 1 LGD 0.1072
36 C26 3.6682 0.3994 0.5984 C.3 1 LGD 0.1073
37 C27 1.3218 0.7758 0.0155 C.3 1 LGD 0.1073
38 H1 -3.1750 -4.1925 4.1677 H 1 LGD 0.1857
39 H2 1.6434 -3.2266 4.9168 H 1 LGD 0.1431
40 H3 2.0479 -0.9629 4.4925 H 1 LGD 0.0364
41 H4 2.4636 -1.9326 3.0461 H 1 LGD 0.0364
42 H5 2.0291 -0.2113 2.8809 H 1 LGD 0.0364
43 H6 0.3593 -6.1946 6.4852 H 1 LGD 0.4452
44 H7 1.7554 -5.2164 6.1556 H 1 LGD 0.4452
45 H8 -0.9178 -0.7458 2.1654 H 1 LGD 0.3149
46 H9 -3.7006 -0.4468 1.0351 H 1 LGD 0.1304
47 H10 -1.0411 -0.5889 -0.5022 H 1 LGD 0.0163
48 H11 -2.3463 -0.0446 -2.5050 H 1 LGD 0.1204
49 H12 -3.8259 0.1310 -1.5435 H 1 LGD 0.1204
50 H13 -2.7800 3.1555 0.1863 H 1 LGD 0.1123
51 H14 -4.0760 1.9590 -0.0094 H 1 LGD 0.1123
52 H15 -1.3262 1.4800 1.2667 H 1 LGD 0.0750
53 H16 -2.8615 1.5767 2.1309 H 1 LGD 0.0750
54 H17 -0.6570 -2.8671 -0.9330 H 1 LGD 0.0509
55 H18 -1.4724 -3.1590 0.6248 H 1 LGD 0.0509
56 H19 -2.0106 -4.0188 -0.8311 H 1 LGD 0.0509
57 H20 -4.0187 2.3023 -2.4637 H 1 LGD 0.1104
58 H21 -2.8847 3.5813 -2.0024 H 1 LGD 0.1104
59 H22 -2.2515 1.3378 -4.0083 H 1 LGD 0.0908
60 H23 -2.7241 2.9749 -4.4302 H 1 LGD 0.0908
61 H24 -0.7112 3.9148 -3.3315 H 1 LGD 0.0326
62 H25 -0.2349 2.3182 -2.7607 H 1 LGD 0.0326
63 H26 0.0728 1.5235 -5.1187 H 1 LGD 0.0709
64 H27 -0.5521 3.0514 -5.7274 H 1 LGD 0.0709
65 H28 1.7952 3.2709 -5.9752 H 1 LGD 0.0996
66 H29 1.4391 4.2243 -4.5379 H 1 LGD 0.0996
67 H30 4.2788 2.0848 -2.1812 H 1 LGD 0.1132
68 H31 3.1708 -0.1292 -2.8341 H 1 LGD 0.1408
69 H32 0.8129 0.4033 -2.0878 H 1 LGD 0.0902
70 H33 1.3975 -1.0170 -1.2327 H 1 LGD 0.0902
71 H34 3.8411 -1.3361 -0.7267 H 1 LGD 0.0902
72 H35 5.0006 -0.0545 -1.0800 H 1 LGD 0.0902
73 H36 3.8987 2.9575 -0.1074 H 1 LGD 0.1151
74 H37 2.1980 3.2301 -0.5266 H 1 LGD 0.1151
75 H38 3.3660 -0.3758 1.3039 H 1 LGD 0.0964
76 H39 4.5715 0.8822 0.9760 H 1 LGD 0.0964
77 H40 0.9815 0.0504 0.7568 H 1 LGD 0.0964
78 H41 0.5575 1.5469 -0.0966 H 1 LGD 0.0964
79 H42 -1.4048 1.7852 -1.2325 H 1 LGD 0.4277
80 H43 2.4219 1.8313 1.4002 H 1 LGD 0.4568
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 5 7 1
8 7 8 1
9 1 9 1
10 2 10 1
11 4 11 1
12 11 12 am
13 11 13 2
14 12 14 1
15 14 15 1
16 15 16 1
17 16 17 1
18 17 18 1
19 18 19 1
20 14 19 1
21 15 20 1
22 20 21 1
23 17 22 1
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 26 27 1
29 27 28 1
30 27 29 2
31 28 30 1
32 31 32 1
33 30 31 1
34 31 33 1
35 30 35 1
36 33 36 1
37 34 35 1
38 34 36 1
39 34 37 1
40 32 37 1
41 3 38 1
42 6 39 1
43 8 40 1
44 8 41 1
45 8 42 1
46 9 43 1
47 9 44 1
48 12 45 1
49 14 46 1
50 15 47 1
51 16 48 1
52 16 49 1
53 18 50 1
54 18 51 1
55 19 52 1
56 19 53 1
57 21 54 1
58 21 55 1
59 21 56 1
60 22 57 1
61 22 58 1
62 23 59 1
63 23 60 1
64 24 61 1
65 24 62 1
66 25 63 1
67 25 64 1
68 26 65 1
69 26 66 1
70 30 67 1
71 31 68 1
72 32 69 1
73 32 70 1
74 33 71 1
75 33 72 1
76 35 73 1
77 35 74 1
78 36 75 1
79 36 76 1
80 37 77 1
81 37 78 1
82 17 79 1
83 34 80 1