@COMMENT
LIGANDBOX_ID = D09934-04
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09934
NAME = Naronapride_dihydrochloride_(USAN)
MOLECULAR_FORMULA = C27H41N4O5Cl
MOLECULAR_WEIGHT = 537.101
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 106.3600
HOMO = -12.1276
LUMO = -6.2492
mLOGS = -2.585
mLOGD = 1.133
mLOGPA = -3.854
@MOLECULE
D09934-04
80 83 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 4.0618 -4.3021 5.4486 C.ar 1 LGD 0.2706
2 C2 2.7741 -4.8312 5.6369 C.ar 1 LGD -0.0926
3 C3 1.7102 -4.3843 4.8405 C.ar 1 LGD 0.0216
4 C4 1.9086 -3.4026 3.8473 C.ar 1 LGD -0.2371
5 C5 3.2123 -2.8734 3.6541 C.ar 1 LGD 0.2199
6 C6 4.2785 -3.3296 4.4619 C.ar 1 LGD -0.2981
7 O1 3.4317 -1.9319 2.6625 O.3 1 LGD -0.4057
8 C7 4.7129 -1.3370 2.3926 C.3 1 LGD 0.1384
9 N1 5.1181 -4.7298 6.2162 N.pl3 1 LGD -0.8471
10 Cl1 2.4686 -6.0548 6.8614 Cl 1 LGD -0.0773
11 C8 0.7163 -2.9683 3.0241 C.2 1 LGD 0.7057
12 N2 0.7417 -1.7565 2.3534 N.am 1 LGD -0.6100
13 O2 -0.2808 -3.6660 2.9397 O.2 1 LGD -0.5971
14 C9 -0.3356 -1.2956 1.4659 C.3 1 LGD 0.1000
15 C10 -0.2676 0.2510 1.3326 C.3 1 LGD 0.1232
16 C11 1.0015 0.6885 0.5646 C.3 1 LGD 0.1048
17 N3 1.0526 0.0429 -0.7716 N.4 1 LGD -0.6652
18 C12 1.1039 -1.4319 -0.6387 C.3 1 LGD 0.0990
19 C13 -0.1674 -1.9487 0.0723 C.3 1 LGD -0.1226
20 O3 -0.2246 0.8714 2.6332 O.3 1 LGD -0.3972
21 C14 -1.4569 0.8322 3.3765 C.3 1 LGD 0.1219
22 C15 2.2593 0.4708 -1.5137 C.3 1 LGD 0.1038
23 C16 2.1624 1.9429 -1.9834 C.3 1 LGD -0.1164
24 C17 0.9930 2.1746 -2.9696 C.3 1 LGD -0.0855
25 C18 0.9318 3.6436 -3.4598 C.3 1 LGD -0.0701
26 C19 -0.0656 3.8724 -4.6259 C.3 1 LGD -0.1256
27 C20 -1.5339 3.8285 -4.1939 C.2 1 LGD 0.6288
28 O4 -1.9725 2.5461 -4.0045 O.3 1 LGD -0.4483
29 O5 -2.2276 4.8244 -4.0718 O.2 1 LGD -0.4849
30 C21 -3.3402 2.2969 -3.6139 C.3 1 LGD 0.1455
31 C22 -3.5811 0.7613 -3.5780 C.3 1 LGD -0.0613
32 C23 -5.0533 0.5435 -3.1401 C.3 1 LGD -0.0967
33 C24 -2.6860 0.1371 -2.4728 C.3 1 LGD -0.0967
34 N4 -4.0499 1.8501 -1.2446 N.4 1 LGD -0.6643
35 C25 -3.5997 2.9047 -2.1946 C.3 1 LGD 0.0800
36 C26 -2.9720 0.8329 -1.1070 C.3 1 LGD 0.1077
37 C27 -5.2995 1.2139 -1.7509 C.3 1 LGD 0.1077
38 H1 0.7205 -4.8032 5.0033 H 1 LGD 0.1769
39 H2 5.2827 -2.9393 4.3310 H 1 LGD 0.1493
40 H3 5.0814 -0.8061 3.2793 H 1 LGD 0.0477
41 H4 5.4386 -2.1082 2.1053 H 1 LGD 0.0477
42 H5 4.6224 -0.6187 1.5684 H 1 LGD 0.0477
43 H6 4.9860 -5.5626 6.7719 H 1 LGD 0.4437
44 H7 6.0513 -4.5000 5.9080 H 1 LGD 0.4437
45 H8 1.5625 -1.1790 2.4636 H 1 LGD 0.3323
46 H9 -1.3101 -1.5841 1.8803 H 1 LGD 0.1060
47 H10 -1.1453 0.6058 0.7846 H 1 LGD 0.0123
48 H11 0.9916 1.7727 0.4462 H 1 LGD 0.1175
49 H12 1.8902 0.4062 1.1318 H 1 LGD 0.1175
50 H13 1.1794 -1.8821 -1.6304 H 1 LGD 0.1152
51 H14 1.9873 -1.7087 -0.0594 H 1 LGD 0.1152
52 H15 -1.0452 -1.7236 -0.5459 H 1 LGD 0.0843
53 H16 -0.1189 -3.0408 0.1684 H 1 LGD 0.0843
54 H17 -2.2706 1.2802 2.7918 H 1 LGD 0.0528
55 H18 -1.7248 -0.2013 3.6286 H 1 LGD 0.0528
56 H19 -1.3459 1.3977 4.3097 H 1 LGD 0.0528
57 H20 3.1347 0.3408 -0.8745 H 1 LGD 0.1094
58 H21 2.3765 -0.1692 -2.3905 H 1 LGD 0.1094
59 H22 2.0639 2.6142 -1.1216 H 1 LGD 0.0887
60 H23 3.1061 2.2090 -2.4766 H 1 LGD 0.0887
61 H24 1.1098 1.5027 -3.8301 H 1 LGD 0.0335
62 H25 0.0488 1.9140 -2.4779 H 1 LGD 0.0335
63 H26 0.6763 4.3043 -2.6209 H 1 LGD 0.0700
64 H27 1.9308 3.9446 -3.8012 H 1 LGD 0.0700
65 H28 0.1261 4.8543 -5.0775 H 1 LGD 0.1014
66 H29 0.0975 3.1255 -5.4133 H 1 LGD 0.1014
67 H30 -4.0234 2.7557 -4.3407 H 1 LGD 0.1134
68 H31 -3.3867 0.3043 -4.5570 H 1 LGD 0.1318
69 H32 -5.7388 0.9685 -3.8843 H 1 LGD 0.0887
70 H33 -5.2750 -0.5296 -3.0764 H 1 LGD 0.0887
71 H34 -2.8899 -0.9378 -2.3868 H 1 LGD 0.0887
72 H35 -1.6247 0.2361 -2.7304 H 1 LGD 0.0887
73 H36 -2.6821 3.3570 -1.8139 H 1 LGD 0.1157
74 H37 -4.3660 3.6790 -2.2632 H 1 LGD 0.1157
75 H38 -3.2705 0.0888 -0.3661 H 1 LGD 0.0988
76 H39 -2.0676 1.3349 -0.7608 H 1 LGD 0.0988
77 H40 -5.6347 0.4633 -1.0328 H 1 LGD 0.0988
78 H41 -6.0736 1.9779 -1.8442 H 1 LGD 0.0988
79 H42 0.2319 0.2972 -1.3033 H 1 LGD 0.4295
80 H43 -4.2316 2.2703 -0.3423 H 1 LGD 0.4594
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 5 7 1
8 7 8 1
9 1 9 1
10 2 10 1
11 4 11 1
12 11 12 am
13 11 13 2
14 12 14 1
15 14 15 1
16 15 16 1
17 16 17 1
18 17 18 1
19 18 19 1
20 14 19 1
21 15 20 1
22 20 21 1
23 17 22 1
24 22 23 1
25 23 24 1
26 24 25 1
27 25 26 1
28 26 27 1
29 27 28 1
30 27 29 2
31 28 30 1
32 31 32 1
33 30 31 1
34 31 33 1
35 30 35 1
36 33 36 1
37 34 35 1
38 34 36 1
39 34 37 1
40 32 37 1
41 3 38 1
42 6 39 1
43 8 40 1
44 8 41 1
45 8 42 1
46 9 43 1
47 9 44 1
48 12 45 1
49 14 46 1
50 15 47 1
51 16 48 1
52 16 49 1
53 18 50 1
54 18 51 1
55 19 52 1
56 19 53 1
57 21 54 1
58 21 55 1
59 21 56 1
60 22 57 1
61 22 58 1
62 23 59 1
63 23 60 1
64 24 61 1
65 24 62 1
66 25 63 1
67 25 64 1
68 26 65 1
69 26 66 1
70 30 67 1
71 31 68 1
72 32 69 1
73 32 70 1
74 33 71 1
75 33 72 1
76 35 73 1
77 35 74 1
78 36 75 1
79 36 76 1
80 37 77 1
81 37 78 1
82 17 79 1
83 34 80 1