@COMMENT
LIGANDBOX_ID = D09935-02
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09935
NAME = Navitoclax_(JAN/USAN/INN)
MOLECULAR_FORMULA = C47H55N5O6F3S3Cl
MOLECULAR_WEIGHT = 974.628
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 128.3600
HOMO = -12.8809
LUMO = -7.7066
mLOGD = 2.414
mLOGS = -5.192
mLOGPA = -4.743
@MOLECULE
D09935-02
122 128 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 2.1054 0.4903 -0.8225 C.3 1 LGD 0.0871
2 N1 2.9260 1.5622 -0.2156 N.4 1 LGD -0.6560
3 C2 2.6332 1.6855 1.2328 C.3 1 LGD 0.0871
4 C3 2.9770 0.3615 1.9446 C.3 1 LGD 0.2198
5 N2 2.1870 -0.7398 1.3555 N.pl3 1 LGD -0.7536
6 C4 2.3439 -0.8685 -0.1142 C.3 1 LGD 0.2198
7 C5 1.4254 -1.6372 2.1217 C.ar 1 LGD 0.2228
8 C6 2.6379 2.8272 -0.9194 C.3 1 LGD 0.1531
9 C7 3.5277 3.9276 -0.3707 C.2 1 LGD -0.2297
10 C8 5.0049 3.7407 -0.6945 C.3 1 LGD -0.0281
11 C9 5.8629 5.0127 -0.4345 C.3 1 LGD -0.0414
12 C10 5.4482 5.6244 0.9362 C.3 1 LGD -0.0734
13 C11 3.9514 6.0160 0.9900 C.3 1 LGD -0.0492
14 C12 3.0484 4.9331 0.4038 C.2 1 LGD 0.0526
15 C13 1.6005 5.0295 0.7100 C.ar 1 LGD -0.1153
16 C14 1.1249 4.7163 1.9964 C.ar 1 LGD -0.1173
17 C15 -0.2493 4.7850 2.2785 C.ar 1 LGD -0.1133
18 C16 -1.1518 5.1706 1.2746 C.ar 1 LGD 0.0279
19 C17 -0.6826 5.4903 -0.0093 C.ar 1 LGD -0.1133
20 C18 0.6912 5.4198 -0.2903 C.ar 1 LGD -0.1173
21 C19 0.7865 -1.2286 3.3116 C.ar 1 LGD -0.1951
22 C20 0.0032 -2.1222 4.0595 C.ar 1 LGD -0.0640
23 C21 -0.1909 -3.4442 3.6229 C.ar 1 LGD -0.1855
24 C22 0.5039 -3.8689 2.4734 C.ar 1 LGD -0.0640
25 C23 1.2851 -2.9791 1.7241 C.ar 1 LGD -0.1951
26 C24 -0.9766 -4.4714 4.4064 C.2 1 LGD 0.6751
27 N3 -2.1646 -4.2632 5.0952 N.am 1 LGD -0.6243
28 S1 -3.2622 -2.9244 5.0008 S.O2 1 LGD 1.2301
29 C25 -3.3920 -2.4181 3.2797 C.ar 1 LGD -0.2887
30 O1 -0.5682 -5.6172 4.4566 O.2 1 LGD -0.5465
31 C26 7.3650 4.6175 -0.3842 C.3 1 LGD -0.0884
32 C27 5.6574 6.0393 -1.5876 C.3 1 LGD -0.0884
33 Cl1 -2.8666 5.2407 1.6200 Cl 1 LGD -0.0690
34 C28 -3.9387 -3.3085 2.3456 C.ar 1 LGD 0.0161
35 C29 -4.1043 -2.9077 1.0139 C.ar 1 LGD -0.2139
36 C30 -3.7161 -1.6237 0.5982 C.ar 1 LGD 0.2765
37 C31 -3.2734 -0.6816 1.5600 C.ar 1 LGD -0.2996
38 C32 -3.0890 -1.0994 2.8931 C.ar 1 LGD 0.0985
39 O2 -2.6387 -1.8406 5.7621 O.2 1 LGD -0.5338
40 O3 -4.5131 -3.5450 5.4427 O.2 1 LGD -0.5338
41 S2 -2.9672 1.0730 1.1773 S.O2 1 LGD 0.9837
42 C33 -1.1552 1.1789 1.0958 C.3 1 LGD 0.5754
43 O4 -3.3788 1.8582 2.3459 O.2 1 LGD -0.4804
44 O5 -3.4865 1.3974 -0.1559 O.2 1 LGD -0.4804
45 F1 -0.6181 1.3598 2.3208 F 1 LGD -0.2202
46 F2 -0.7470 2.2001 0.3126 F 1 LGD -0.2202
47 F3 -0.6448 0.0427 0.5863 F 1 LGD -0.2202
48 N4 -3.8086 -1.3109 -0.7396 N.pl3 1 LGD -0.7621
49 C34 -2.6610 -1.5456 -1.6471 C.3 1 LGD 0.2256
50 C35 -2.9284 -0.7747 -2.9597 C.3 1 LGD 0.0019
51 C36 -2.4218 -3.0573 -1.9171 C.3 1 LGD -0.1125
52 C37 -1.6625 -3.7711 -0.7692 C.3 1 LGD 0.1026
53 N5 -2.3639 -5.0134 -0.3790 N.4 1 LGD -0.6682
54 S3 -1.3581 -0.5074 -3.8915 S.3 1 LGD -0.3574
55 C38 -1.9056 0.2850 -5.3938 C.ar 1 LGD 0.0248
56 C39 -1.3015 1.4840 -5.8098 C.ar 1 LGD -0.0987
57 C40 -1.7205 2.1096 -6.9959 C.ar 1 LGD -0.1188
58 C41 -2.7395 1.5336 -7.7720 C.ar 1 LGD -0.0893
59 C42 -3.3394 0.3321 -7.3619 C.ar 1 LGD -0.1188
60 C43 -2.9235 -0.2916 -6.1744 C.ar 1 LGD -0.0987
61 C44 -1.7945 -5.5400 0.8800 C.3 1 LGD 0.0613
62 C45 -2.6053 -6.7739 1.3362 C.3 1 LGD 0.1142
63 O6 -2.5492 -7.7485 0.2766 O.3 1 LGD -0.3717
64 C46 -3.1114 -7.2858 -0.9676 C.3 1 LGD 0.1142
65 C47 -2.2911 -6.0567 -1.4304 C.3 1 LGD 0.0613
66 H1 1.0546 0.7676 -0.7370 H 1 LGD 0.1112
67 H2 2.3531 0.4016 -1.8817 H 1 LGD 0.1112
68 H3 3.2292 2.4951 1.6570 H 1 LGD 0.1112
69 H4 1.5757 1.9174 1.3673 H 1 LGD 0.1112
70 H5 4.0471 0.1516 1.8223 H 1 LGD 0.0813
71 H6 2.7861 0.4654 3.0181 H 1 LGD 0.0813
72 H7 3.3535 -1.2302 -0.3462 H 1 LGD 0.0813
73 H8 1.6225 -1.5892 -0.5179 H 1 LGD 0.0813
74 H9 2.8258 2.6897 -1.9857 H 1 LGD 0.1042
75 H10 1.5829 3.0719 -0.7852 H 1 LGD 0.1042
76 H11 5.3911 2.9158 -0.0814 H 1 LGD 0.0372
77 H12 5.1236 3.4281 -1.7403 H 1 LGD 0.0372
78 H13 5.6476 4.8937 1.7314 H 1 LGD 0.0567
79 H14 6.0633 6.5055 1.1614 H 1 LGD 0.0567
80 H15 3.6742 6.2205 2.0319 H 1 LGD 0.0808
81 H16 3.7991 6.9556 0.4442 H 1 LGD 0.0808
82 H17 1.8195 4.4124 2.7744 H 1 LGD 0.1442
83 H18 -0.6134 4.5353 3.2711 H 1 LGD 0.1645
84 H19 -1.3811 5.7880 -0.7863 H 1 LGD 0.1645
85 H20 1.0510 5.6644 -1.2860 H 1 LGD 0.1442
86 H21 0.8909 -0.2125 3.6760 H 1 LGD 0.1457
87 H22 -0.4038 -1.7833 5.0021 H 1 LGD 0.1642
88 H23 0.4620 -4.9085 2.1659 H 1 LGD 0.1642
89 H24 1.8032 -3.3521 0.8459 H 1 LGD 0.1457
90 H25 -2.5156 -5.0668 5.5924 H 1 LGD 0.3688
91 H26 7.9985 5.4993 -0.2239 H 1 LGD 0.0450
92 H27 7.5616 3.9101 0.4319 H 1 LGD 0.0450
93 H28 7.6783 4.1425 -1.3229 H 1 LGD 0.0450
94 H29 6.0489 5.6463 -2.5348 H 1 LGD 0.0450
95 H30 4.5962 6.2704 -1.7425 H 1 LGD 0.0450
96 H31 6.1815 6.9795 -1.3731 H 1 LGD 0.0450
97 H32 -4.2440 -4.3051 2.6533 H 1 LGD 0.1579
98 H33 -4.5445 -3.5940 0.2977 H 1 LGD 0.1439
99 H34 -2.7350 -0.3872 3.6337 H 1 LGD 0.1876
100 H35 -4.0467 -0.3366 -0.8746 H 1 LGD 0.4350
101 H36 -1.7609 -1.1167 -1.1956 H 1 LGD 0.0356
102 H37 -3.6463 -1.3262 -3.5788 H 1 LGD 0.0949
103 H38 -3.3506 0.2131 -2.7356 H 1 LGD 0.0949
104 H39 -3.3897 -3.5378 -2.1098 H 1 LGD 0.0886
105 H40 -1.8317 -3.1846 -2.8332 H 1 LGD 0.0886
106 H41 -0.6413 -4.0050 -1.0766 H 1 LGD 0.0990
107 H42 -1.6172 -3.1088 0.0978 H 1 LGD 0.0990
108 H43 -0.5122 1.9315 -5.2125 H 1 LGD 0.1317
109 H44 -1.2553 3.0383 -7.3140 H 1 LGD 0.1513
110 H45 -3.0615 2.0154 -8.6910 H 1 LGD 0.1553
111 H46 -4.1232 -0.1174 -7.9650 H 1 LGD 0.1513
112 H47 -3.3838 -1.2268 -5.8703 H 1 LGD 0.1317
113 H48 -0.7557 -5.8268 0.7082 H 1 LGD 0.1108
114 H49 -1.8306 -4.7658 1.6485 H 1 LGD 0.1108
115 H50 -2.1655 -7.1879 2.2522 H 1 LGD 0.0984
116 H51 -3.6451 -6.4903 1.5428 H 1 LGD 0.0984
117 H52 -3.0538 -8.0786 -1.7234 H 1 LGD 0.0984
118 H53 -4.1646 -7.0074 -0.8312 H 1 LGD 0.0984
119 H54 -1.2492 -6.3413 -1.5882 H 1 LGD 0.1108
120 H55 -2.7008 -5.6681 -2.3642 H 1 LGD 0.1108
121 H56 3.9046 1.3397 -0.3350 H 1 LGD 0.4493
122 H57 -3.3354 -4.7918 -0.2192 H 1 LGD 0.4479
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 2 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 13 14 1
15 9 14 2
16 14 15 1
17 15 16 ar
18 16 17 ar
19 17 18 ar
20 18 19 ar
21 19 20 ar
22 15 20 ar
23 7 21 ar
24 21 22 ar
25 22 23 ar
26 23 24 ar
27 24 25 ar
28 7 25 ar
29 23 26 1
30 26 27 am
31 27 28 1
32 28 29 1
33 26 30 2
34 11 31 1
35 11 32 1
36 18 33 1
37 29 34 ar
38 34 35 ar
39 35 36 ar
40 36 37 ar
41 37 38 ar
42 29 38 ar
43 28 39 2
44 28 40 2
45 37 41 1
46 41 42 1
47 41 43 2
48 41 44 2
49 42 45 1
50 42 46 1
51 42 47 1
52 36 48 1
53 48 49 1
54 49 50 1
55 49 51 1
56 51 52 1
57 52 53 1
58 50 54 1
59 54 55 1
60 55 56 ar
61 56 57 ar
62 57 58 ar
63 58 59 ar
64 59 60 ar
65 55 60 ar
66 53 61 1
67 61 62 1
68 62 63 1
69 63 64 1
70 64 65 1
71 53 65 1
72 1 66 1
73 1 67 1
74 3 68 1
75 3 69 1
76 4 70 1
77 4 71 1
78 6 72 1
79 6 73 1
80 8 74 1
81 8 75 1
82 10 76 1
83 10 77 1
84 12 78 1
85 12 79 1
86 13 80 1
87 13 81 1
88 16 82 1
89 17 83 1
90 19 84 1
91 20 85 1
92 21 86 1
93 22 87 1
94 24 88 1
95 25 89 1
96 27 90 1
97 31 91 1
98 31 92 1
99 31 93 1
100 32 94 1
101 32 95 1
102 32 96 1
103 34 97 1
104 35 98 1
105 38 99 1
106 48 100 1
107 49 101 1
108 50 102 1
109 50 103 1
110 51 104 1
111 51 105 1
112 52 106 1
113 52 107 1
114 56 108 1
115 57 109 1
116 58 110 1
117 59 111 1
118 60 112 1
119 61 113 1
120 61 114 1
121 62 115 1
122 62 116 1
123 64 117 1
124 64 118 1
125 65 119 1
126 65 120 1
127 2 121 1
128 53 122 1