@COMMENT
LIGANDBOX_ID = D09936-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D09936
NAME = Navitoclax_dihydrochloride_(USAN)
MOLECULAR_FORMULA = C47H55N5O6F3S3Cl
MOLECULAR_WEIGHT = 974.628
MOLECULAR_CHARGE = 0
NUM_OF_DONOR = 2
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 128.3600
HOMO = -11.5942
LUMO = -5.8312
mLOGS = -5.175
mLOGPA = -4.407
mLOGD = 3.476
@MOLECULE
D09936-01
122 128 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 22.7380 -27.7730 0.0190 C.3 1 LGD 0.0907
2 N1 21.6200 -27.2080 0.8080 N.4 1 LGD -0.6516
3 C2 22.1290 -26.6080 2.0610 C.3 1 LGD 0.0907
4 C3 23.1820 -25.5030 1.7850 C.3 1 LGD 0.2084
5 N2 24.2730 -26.0010 0.9120 N.pl3 1 LGD -0.7338
6 C4 23.8100 -26.7000 -0.3090 C.3 1 LGD 0.2084
7 C5 25.5170 -25.3660 0.9390 C.ar 1 LGD 0.1742
8 C6 20.7160 -26.3070 0.0510 C.3 1 LGD 0.1673
9 C7 19.9560 -27.0330 -1.0580 C.2 1 LGD -0.2066
10 C8 18.7650 -27.8300 -0.5320 C.3 1 LGD -0.0292
11 C9 18.2730 -28.9290 -1.5150 C.3 1 LGD -0.0463
12 C10 18.1520 -28.2980 -2.9310 C.3 1 LGD -0.0727
13 C11 19.4980 -27.7390 -3.4500 C.3 1 LGD -0.0450
14 C12 20.2750 -26.9670 -2.3810 C.2 1 LGD 0.0380
15 C13 21.4330 -26.1800 -2.8770 C.ar 1 LGD -0.1054
16 C14 22.5360 -26.8420 -3.4470 C.ar 1 LGD -0.1169
17 C15 23.6520 -26.1110 -3.8860 C.ar 1 LGD -0.1171
18 C16 23.6640 -24.7130 -3.7650 C.ar 1 LGD 0.0309
19 C17 22.5550 -24.0430 -3.2250 C.ar 1 LGD -0.1171
20 C18 21.4380 -24.7750 -2.7900 C.ar 1 LGD -0.1169
21 C19 26.2520 -25.3140 2.1370 C.ar 1 LGD -0.1684
22 C20 27.5030 -24.6790 2.1820 C.ar 1 LGD -0.0526
23 C21 28.0470 -24.0800 1.0280 C.ar 1 LGD -0.1595
24 C22 27.3100 -24.1310 -0.1740 C.ar 1 LGD -0.0526
25 C23 26.0590 -24.7670 -0.2160 C.ar 1 LGD -0.1684
26 C24 29.3990 -23.4110 1.0960 C.2 1 LGD 0.7043
27 N3 29.9720 -22.9040 -0.0650 N.am 1 LGD -0.6228
28 S1 31.5630 -22.2100 -0.1440 S.O2 1 LGD 1.2392
29 C25 32.6280 -23.6440 0.0940 C.ar 1 LGD -0.3041
30 O1 29.9990 -23.3240 2.1530 O.2 1 LGD -0.5491
31 C26 19.2680 -30.1290 -1.5180 C.3 1 LGD -0.0872
32 C27 16.8780 -29.4420 -1.0620 C.3 1 LGD -0.0872
33 Cl1 25.0670 -23.8030 -4.2840 Cl 1 LGD -0.0848
34 C28 33.0590 -24.3830 -1.0170 C.ar 1 LGD 0.0181
35 C29 33.8560 -25.5190 -0.8340 C.ar 1 LGD -0.2583
36 C30 34.2330 -25.9340 0.4570 C.ar 1 LGD 0.2728
37 C31 33.7700 -25.2130 1.5910 C.ar 1 LGD -0.2761
38 C32 32.9850 -24.0610 1.3870 C.ar 1 LGD 0.0929
39 O2 31.6970 -21.3510 1.0370 O.2 1 LGD -0.5475
40 O3 31.6800 -21.7180 -1.5200 O.2 1 LGD -0.5475
41 S2 34.0110 -25.7390 3.3170 S.O2 1 LGD 0.9942
42 C33 32.4540 -26.6110 3.6690 C.3 1 LGD 0.6085
43 O4 34.0200 -24.5400 4.1620 O.2 1 LGD -0.5084
44 O5 35.0790 -26.7360 3.4300 O.2 1 LGD -0.5084
45 F1 31.3890 -25.7910 3.5360 F 1 LGD -0.2077
46 F2 32.4430 -27.0980 4.9290 F 1 LGD -0.2077
47 F3 32.2800 -27.6500 2.8230 F 1 LGD -0.2077
48 N4 35.0410 -27.0460 0.5400 N.pl3 1 LGD -0.7424
49 C34 36.5050 -26.9270 0.7440 C.3 1 LGD 0.2376
50 C35 37.0670 -28.3580 0.9330 C.3 1 LGD 0.0180
51 C36 37.2010 -26.1730 -0.4270 C.3 1 LGD -0.1387
52 C37 37.1750 -24.6280 -0.2340 C.3 1 LGD 0.1103
53 N5 37.7280 -23.8660 -1.3780 N.4 1 LGD -0.6696
54 S3 36.8190 -29.4060 -0.5720 S.3 1 LGD -0.3528
55 C38 37.3650 -31.0550 -0.1290 C.ar 1 LGD 0.0598
56 C39 37.1780 -32.0880 -1.0640 C.ar 1 LGD -0.1227
57 C40 37.5810 -33.4000 -0.7660 C.ar 1 LGD -0.1087
58 C41 38.1740 -33.6880 0.4720 C.ar 1 LGD -0.1148
59 C42 38.3670 -32.6620 1.4100 C.ar 1 LGD -0.1087
60 C43 37.9670 -31.3490 1.1130 C.ar 1 LGD -0.1227
61 C44 36.9170 -23.9240 -2.6190 C.3 1 LGD 0.0591
62 C45 37.4820 -22.9620 -3.6920 C.3 1 LGD 0.1154
63 O6 38.8740 -23.2810 -3.8960 O.3 1 LGD -0.3779
64 C46 39.6850 -23.0930 -2.7180 C.3 1 LGD 0.1154
65 C47 39.1770 -24.0600 -1.6210 C.3 1 LGD 0.0591
66 H1 23.2160 -28.5750 0.5960 H 1 LGD 0.1089
67 H2 22.3650 -28.2220 -0.9090 H 1 LGD 0.1089
68 H3 21.3000 -26.1870 2.6450 H 1 LGD 0.1089
69 H4 22.5960 -27.3900 2.6730 H 1 LGD 0.1089
70 H5 22.6950 -24.6450 1.3050 H 1 LGD 0.0757
71 H6 23.5900 -25.1620 2.7440 H 1 LGD 0.0757
72 H7 23.3940 -25.9650 -1.0050 H 1 LGD 0.0757
73 H8 24.6580 -27.1930 -0.8030 H 1 LGD 0.0757
74 H9 19.9770 -25.8790 0.7420 H 1 LGD 0.1020
75 H10 21.2820 -25.4600 -0.3490 H 1 LGD 0.1020
76 H11 19.0150 -28.2980 0.4300 H 1 LGD 0.0472
77 H12 17.9430 -27.1310 -0.3280 H 1 LGD 0.0472
78 H13 17.7650 -29.0360 -3.6450 H 1 LGD 0.0628
79 H14 17.4200 -27.4800 -2.9000 H 1 LGD 0.0628
80 H15 20.1110 -28.5700 -3.8200 H 1 LGD 0.0735
81 H16 19.3060 -27.0930 -4.3160 H 1 LGD 0.0735
82 H17 22.5390 -27.9250 -3.5290 H 1 LGD 0.1477
83 H18 24.5080 -26.6300 -4.3090 H 1 LGD 0.1621
84 H19 22.5610 -22.9610 -3.1380 H 1 LGD 0.1621
85 H20 20.5840 -24.2540 -2.3680 H 1 LGD 0.1477
86 H21 25.8580 -25.7760 3.0370 H 1 LGD 0.1437
87 H22 28.0500 -24.6610 3.1200 H 1 LGD 0.1551
88 H23 27.6930 -23.6770 -1.0830 H 1 LGD 0.1551
89 H24 25.5080 -24.7800 -1.1520 H 1 LGD 0.1437
90 H25 29.4640 -23.0060 -0.9300 H 1 LGD 0.3365
91 H26 19.2730 -30.6340 -0.5440 H 1 LGD 0.0412
92 H27 18.9880 -30.8680 -2.2790 H 1 LGD 0.0412
93 H28 20.2960 -29.8060 -1.7230 H 1 LGD 0.0412
94 H29 16.1390 -28.6300 -1.0590 H 1 LGD 0.0412
95 H30 16.5110 -30.2270 -1.7360 H 1 LGD 0.0412
96 H31 16.9230 -29.8610 -0.0490 H 1 LGD 0.0412
97 H32 32.7770 -24.0810 -2.0220 H 1 LGD 0.1582
98 H33 34.1920 -26.0760 -1.7040 H 1 LGD 0.1472
99 H34 32.6210 -23.5020 2.2440 H 1 LGD 0.2024
100 H35 34.9250 -27.6800 -0.2380 H 1 LGD 0.4217
101 H36 36.7080 -26.3680 1.6650 H 1 LGD 0.0904
102 H37 38.1390 -28.3070 1.1580 H 1 LGD 0.0966
103 H38 36.5560 -28.8330 1.7800 H 1 LGD 0.0966
104 H39 38.2480 -26.4960 -0.4840 H 1 LGD 0.0765
105 H40 36.7340 -26.4570 -1.3780 H 1 LGD 0.0765
106 H41 36.1470 -24.2930 -0.0560 H 1 LGD 0.1014
107 H42 37.7450 -24.3820 0.6710 H 1 LGD 0.1014
108 H43 36.7160 -31.8730 -2.0240 H 1 LGD 0.1341
109 H44 37.4310 -34.1920 -1.4940 H 1 LGD 0.1463
110 H45 38.4850 -34.7030 0.7040 H 1 LGD 0.1478
111 H46 38.8270 -32.8840 2.3680 H 1 LGD 0.1463
112 H47 38.1310 -30.5750 1.8540 H 1 LGD 0.1341
113 H48 36.9220 -24.9420 -3.0270 H 1 LGD 0.1119
114 H49 35.8770 -23.6500 -2.4010 H 1 LGD 0.1119
115 H50 36.9270 -23.0860 -4.6300 H 1 LGD 0.0970
116 H51 37.3750 -21.9220 -3.3580 H 1 LGD 0.0970
117 H52 40.7360 -23.3090 -2.9460 H 1 LGD 0.0970
118 H53 39.6110 -22.0550 -2.3670 H 1 LGD 0.0970
119 H54 39.3710 -25.0900 -1.9460 H 1 LGD 0.1119
120 H55 39.7400 -23.8830 -0.6960 H 1 LGD 0.1119
121 H56 21.1597 -27.9488 1.2972 H 1 LGD 0.4409
122 H57 37.3829 -22.9281 -1.3417 H 1 LGD 0.4460
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 1
5 5 6 1
6 1 6 1
7 5 7 1
8 2 8 1
9 8 9 1
10 9 10 1
11 10 11 1
12 11 12 1
13 12 13 1
14 13 14 1
15 9 14 2
16 14 15 1
17 15 16 ar
18 16 17 ar
19 17 18 ar
20 18 19 ar
21 19 20 ar
22 15 20 ar
23 7 21 ar
24 21 22 ar
25 22 23 ar
26 23 24 ar
27 24 25 ar
28 7 25 ar
29 23 26 1
30 26 27 am
31 27 28 1
32 28 29 1
33 26 30 2
34 11 31 1
35 11 32 1
36 18 33 1
37 29 34 ar
38 34 35 ar
39 35 36 ar
40 36 37 ar
41 37 38 ar
42 29 38 ar
43 28 39 2
44 28 40 2
45 37 41 1
46 41 42 1
47 41 43 2
48 41 44 2
49 42 45 1
50 42 46 1
51 42 47 1
52 36 48 1
53 48 49 1
54 49 50 1
55 49 51 1
56 51 52 1
57 52 53 1
58 50 54 1
59 54 55 1
60 55 56 ar
61 56 57 ar
62 57 58 ar
63 58 59 ar
64 59 60 ar
65 55 60 ar
66 53 61 1
67 61 62 1
68 62 63 1
69 63 64 1
70 64 65 1
71 53 65 1
72 1 66 1
73 1 67 1
74 3 68 1
75 3 69 1
76 4 70 1
77 4 71 1
78 6 72 1
79 6 73 1
80 8 74 1
81 8 75 1
82 10 76 1
83 10 77 1
84 12 78 1
85 12 79 1
86 13 80 1
87 13 81 1
88 16 82 1
89 17 83 1
90 19 84 1
91 20 85 1
92 21 86 1
93 22 87 1
94 24 88 1
95 25 89 1
96 27 90 1
97 31 91 1
98 31 92 1
99 31 93 1
100 32 94 1
101 32 95 1
102 32 96 1
103 34 97 1
104 35 98 1
105 38 99 1
106 48 100 1
107 49 101 1
108 50 102 1
109 50 103 1
110 51 104 1
111 51 105 1
112 52 106 1
113 52 107 1
114 56 108 1
115 57 109 1
116 58 110 1
117 59 111 1
118 60 112 1
119 61 113 1
120 61 114 1
121 62 115 1
122 62 116 1
123 64 117 1
124 64 118 1
125 65 119 1
126 65 120 1
127 2 121 1
128 53 122 1