@COMMENT
LIGANDBOX_ID = D10596-01
SOURCE = KEGG_MEDICUS
COPYRIGHT = KEGG_MEDICUS_(C)_Minoru_Kanehisa_(Institute_for_Chemical_Research,_Kyoto_University)_licensed_under_CC_Attribution-Share_Alike_4.0_International
ENTRY = D10596
NAME = Pemetrexed_sodium_hemipentahydrate_(JAN)_Pemetrexed_disodium_hemipentahydrate_Pemetrexed_accord_(TN)
MOLECULAR_FORMULA = C20H19N5O6
MOLECULAR_WEIGHT = 425.401
MOLECULAR_CHARGE = -2
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 192.6300
HOMO = -1.8788
LUMO = 4.3219
mLOGPA = -7.112
mLOGD = -1.885
mLOGS = -1.409
@MOLECULE
D10596-01
50 52 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 16.6000 -15.6550 -3.2020 C.ar 1 LGD -0.1328
2 C2 15.5860 -16.1500 -2.3650 C.ar 1 LGD -0.0819
3 C3 15.9230 -16.6410 -1.0910 C.ar 1 LGD -0.1328
4 C4 17.2530 -16.6070 -0.6460 C.ar 1 LGD -0.0940
5 C5 18.2710 -16.0870 -1.4730 C.ar 1 LGD -0.1111
6 C6 17.9310 -15.6220 -2.7600 C.ar 1 LGD -0.0940
7 C7 14.1290 -16.1010 -2.8070 C.3 1 LGD -0.0162
8 C8 13.4480 -14.7650 -2.4210 C.3 1 LGD -0.0036
9 C9 13.5090 -14.5090 -0.9330 C.ar 1 LGD -0.0688
10 C10 14.5190 -13.7660 -0.2740 C.ar 1 LGD -0.2934
11 C11 14.2680 -13.8240 1.0550 C.ar 1 LGD 0.2473
12 N1 13.1140 -14.5750 1.2450 N.ar 1 LGD -0.2037
13 C12 12.6370 -15.0080 0.0030 C.ar 1 LGD -0.1914
14 C13 15.6980 -13.0260 -0.7380 C.2 1 LGD 0.7603
15 N2 16.4740 -12.4510 0.2600 N.am 1 LGD -0.5105
16 C14 16.1260 -12.5710 1.6080 C.2 1 LGD 0.7413
17 N3 15.0490 -13.2400 2.0190 N.2 1 LGD -0.7582
18 N4 16.9200 -11.9730 2.5480 N.pl3 1 LGD -0.9066
19 C15 19.6970 -15.9980 -0.9900 C.2 1 LGD 0.6646
20 N5 20.0230 -16.4920 0.2660 N.am 1 LGD -0.5314
21 C16 21.3520 -16.3150 0.8800 C.3 1 LGD 0.0094
22 C17 21.2710 -15.2230 1.9830 C.3 1 LGD -0.0660
23 C18 20.8820 -13.8290 1.4260 C.3 1 LGD -0.1734
24 C19 20.9260 -12.7450 2.5070 C.2 1 LGD 0.8938
25 O1 19.9440 -12.8440 3.4310 O.co2 1 LGD -0.8825
26 O2 20.5680 -15.4840 -1.6710 O.2 1 LGD -0.6287
27 C20 21.8370 -17.6720 1.4250 C.2 1 LGD 0.8826
28 O3 22.0560 -18.5960 0.4620 O.co2 1 LGD -0.8515
29 O4 22.0100 -17.9180 2.6050 O.co2 1 LGD -0.8515
30 O5 21.7160 -11.8190 2.5010 O.co2 1 LGD -0.8825
31 O6 16.0260 -12.8810 -1.9010 O.2 1 LGD -0.6328
32 H1 16.3520 -15.2680 -4.1860 H 1 LGD 0.1188
33 H2 15.1490 -17.0240 -0.4330 H 1 LGD 0.1188
34 H3 17.4760 -16.9720 0.3520 H 1 LGD 0.1436
35 H4 18.6950 -15.2160 -3.4160 H 1 LGD 0.1436
36 H5 14.0600 -16.2400 -3.8940 H 1 LGD 0.0275
37 H6 13.5720 -16.9340 -2.3580 H 1 LGD 0.0275
38 H7 13.9140 -13.9420 -2.9760 H 1 LGD 0.0409
39 H8 12.4000 -14.7940 -2.7460 H 1 LGD 0.0409
40 H9 12.6950 -14.7800 2.1410 H 1 LGD 0.2926
41 H10 11.7560 -15.6290 -0.1020 H 1 LGD 0.1572
42 H11 17.2920 -11.9220 0.0000 H 1 LGD 0.3451
43 H12 17.8370 -11.6530 2.2730 H 1 LGD 0.4705
44 H13 16.7620 -12.2090 3.5170 H 1 LGD 0.4705
45 H14 19.3050 -16.9560 0.8020 H 1 LGD 0.2983
46 H15 22.0880 -16.0000 0.1290 H 1 LGD 0.0746
47 H16 20.5490 -15.5290 2.7510 H 1 LGD 0.0478
48 H17 22.2480 -15.1440 2.4780 H 1 LGD 0.0478
49 H18 21.5650 -13.5450 0.6150 H 1 LGD 0.0170
50 H19 19.8690 -13.8540 1.0040 H 1 LGD 0.0170
@BOND
1 1 2 ar
2 2 3 ar
3 3 4 ar
4 4 5 ar
5 5 6 ar
6 1 6 ar
7 2 7 1
8 7 8 1
9 8 9 1
10 9 10 1
11 10 11 2
12 11 12 1
13 12 13 1
14 9 13 2
15 10 14 1
16 14 15 am
17 15 16 1
18 16 17 2
19 11 17 1
20 16 18 1
21 5 19 1
22 19 20 am
23 20 21 1
24 21 22 1
25 22 23 1
26 23 24 1
27 24 25 1
28 19 26 2
29 21 27 1
30 27 28 1
31 27 29 2
32 24 30 2
33 14 31 2
34 1 32 1
35 3 33 1
36 4 34 1
37 6 35 1
38 7 36 1
39 7 37 1
40 8 38 1
41 8 39 1
42 12 40 1
43 13 41 1
44 15 42 1
45 18 43 1
46 18 44 1
47 20 45 1
48 21 46 1
49 22 47 1
50 22 48 1
51 23 49 1
52 23 50 1