@COMMENT
LIGANDBOX_ID = PDB_1YN-03
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C35H38N8O4Cl2
MOLECULAR_WEIGHT = 705.647
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 370
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 370
NUM_OF_DONOR = 0
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 3
TPSA = 100.7900
HOMO = -8.1718
LUMO = -0.6772
mLOGPA = -5.339
mLOGD = 4.489
mLOGS = -5.893
@MOLECULE
PDB_1YN-03
87 93 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.7766 -6.2409 1.1541 C.ar 1 LGD -0.1125
2 C2 -0.8102 -7.0861 0.0277 C.ar 1 LGD 0.0374
3 C3 -2.5189 -13.5702 -2.2999 C.3 1 LGD -0.0882
4 C4 -1.9494 -12.4478 -1.4026 C.3 1 LGD -0.0991
5 C5 -3.0292 -11.4616 -0.8763 C.3 1 LGD 0.1649
6 C6 -4.0392 -12.1580 0.0727 C.3 1 LGD -0.0981
7 N1 -2.3868 -10.3094 -0.2154 N.am 1 LGD -0.2462
8 C7 -2.0935 -9.1114 -0.8385 C.2 1 LGD 0.7754
9 O1 -2.3706 -8.7864 -1.9806 O.2 1 LGD -0.6380
10 N2 -1.4250 -8.3707 0.1012 N.am 1 LGD -0.3003
11 C8 -1.3133 -9.1607 1.2260 C.2 1 LGD 0.3468
12 N3 -1.8763 -10.3162 1.0649 N.2 1 LGD -0.4695
13 C9 -0.1777 -4.9732 1.0762 C.ar 1 LGD -0.1556
14 C10 0.3953 -4.5245 -0.1300 C.ar 1 LGD 0.1716
15 C11 0.3589 -5.3695 -1.2540 C.ar 1 LGD -0.1556
16 C12 -0.2370 -6.6386 -1.1773 C.ar 1 LGD -0.1125
17 N4 0.9825 -3.2608 -0.2257 N.pl3 1 LGD -0.7258
18 C13 0.4309 -2.2656 -1.1752 C.3 1 LGD 0.2034
19 C14 1.5216 -1.2719 -1.6467 C.3 1 LGD 0.2373
20 N5 2.2261 -0.6766 -0.4916 N.pl3 1 LGD -0.7578
21 C15 2.7940 -1.6654 0.4479 C.3 1 LGD 0.2373
22 C16 1.7023 -2.6593 0.9226 C.3 1 LGD 0.2034
23 C17 2.1916 0.6887 -0.2024 C.ar 1 LGD 0.1596
24 C18 3.3654 1.3625 0.1828 C.ar 1 LGD -0.1397
25 C19 3.3351 2.7351 0.4791 C.ar 1 LGD -0.1569
26 C20 2.1294 3.4511 0.4096 C.ar 1 LGD 0.1194
27 C21 0.9476 2.7812 0.0294 C.ar 1 LGD -0.1569
28 C22 0.9843 1.4104 -0.2786 C.ar 1 LGD -0.1397
29 O2 2.1500 4.7981 0.7170 O.3 1 LGD -0.3611
30 C23 0.9559 5.5845 0.8911 C.3 1 LGD 0.1474
31 C24 1.3780 7.0375 1.2040 C.3 1 LGD 0.1125
32 C25 1.9523 7.7747 -0.0121 C.3 1 LGD 0.1064
33 O3 1.5392 9.1190 0.2252 O.3 1 LGD -0.4068
34 C26 0.2306 9.0583 0.8239 C.3 1 LGD 0.3779
35 O4 0.2131 7.8072 1.5485 O.3 1 LGD -0.4270
36 C27 0.0463 10.2172 1.8475 C.3 1 LGD 0.0723
37 N6 1.2810 10.6862 2.4974 N.ar 1 LGD -0.0846
38 C28 2.2723 11.4975 1.9566 C.ar 1 LGD 0.4598
39 N7 3.1634 11.7266 2.8869 N.ar 1 LGD -0.7055
40 C29 2.6916 11.0551 3.9648 C.ar 1 LGD 0.5149
41 N8 1.5570 10.4028 3.8151 N.ar 1 LGD -0.5038
42 C30 -0.8544 9.0634 -0.2767 C.ar 1 LGD -0.1184
43 C31 -0.8770 10.0572 -1.2920 C.ar 1 LGD 0.0611
44 C32 -1.8755 10.0435 -2.2798 C.ar 1 LGD -0.1209
45 C33 -2.8654 9.0531 -2.2716 C.ar 1 LGD 0.0463
46 C34 -2.8658 8.0738 -1.2708 C.ar 1 LGD -0.1285
47 C35 -1.8713 8.0794 -0.2805 C.ar 1 LGD -0.0858
48 CL1 -4.1068 9.0459 -3.5068 Cl 1 LGD -0.0943
49 CL2 0.3122 11.3525 -1.3664 Cl 1 LGD -0.0958
50 H1 -1.2289 -6.5537 2.0907 H 1 LGD 0.1473
51 H2 -3.1610 -14.2512 -1.7280 H 1 LGD 0.0358
52 H3 -3.1057 -13.1500 -3.1265 H 1 LGD 0.0358
53 H4 -1.7025 -14.1637 -2.7303 H 1 LGD 0.0358
54 H5 -1.4083 -12.8937 -0.5580 H 1 LGD 0.0507
55 H6 -1.2092 -11.8836 -1.9849 H 1 LGD 0.0507
56 H7 -3.5927 -11.0814 -1.7382 H 1 LGD 0.0798
57 H8 -4.6298 -12.9120 -0.4616 H 1 LGD 0.0468
58 H9 -3.5250 -12.6518 0.9071 H 1 LGD 0.0468
59 H10 -4.7407 -11.4247 0.4901 H 1 LGD 0.0468
60 H11 -0.7822 -8.8069 2.0999 H 1 LGD 0.0756
61 H12 -0.1782 -4.3352 1.9550 H 1 LGD 0.1414
62 H13 0.8022 -5.0452 -2.1911 H 1 LGD 0.1414
63 H14 -0.2419 -7.2746 -2.0575 H 1 LGD 0.1473
64 H15 -0.3769 -1.7062 -0.6865 H 1 LGD 0.0420
65 H16 0.0089 -2.7688 -2.0539 H 1 LGD 0.0420
66 H17 2.2456 -1.8042 -2.2767 H 1 LGD 0.0524
67 H18 1.0627 -0.4890 -2.2631 H 1 LGD 0.0524
68 H19 3.6012 -2.2194 -0.0480 H 1 LGD 0.0524
69 H20 3.2225 -1.1603 1.3225 H 1 LGD 0.0524
70 H21 2.1796 -3.4458 1.5207 H 1 LGD 0.0420
71 H22 0.9882 -2.1272 1.5640 H 1 LGD 0.0420
72 H23 4.3069 0.8239 0.2432 H 1 LGD 0.1374
73 H24 4.2495 3.2440 0.7702 H 1 LGD 0.1394
74 H25 -0.0003 3.3058 -0.0353 H 1 LGD 0.1394
75 H26 0.0652 0.9065 -0.5632 H 1 LGD 0.1374
76 H27 0.3458 5.5646 -0.0210 H 1 LGD 0.0463
77 H28 0.3647 5.1830 1.7238 H 1 LGD 0.0463
78 H29 2.0960 7.0621 2.0337 H 1 LGD 0.0908
79 H30 3.0451 7.6925 -0.0602 H 1 LGD 0.0743
80 H31 1.5068 7.3998 -0.9428 H 1 LGD 0.0743
81 H32 -0.4168 11.0754 1.3469 H 1 LGD 0.0859
82 H33 -0.6561 9.8912 2.6254 H 1 LGD 0.0859
83 H34 2.2682 11.8602 0.9371 H 1 LGD 0.0766
84 H35 3.2377 11.0763 4.8987 H 1 LGD 0.0579
85 H36 -1.8822 10.8071 -3.0526 H 1 LGD 0.1642
86 H37 -3.6382 7.3100 -1.2583 H 1 LGD 0.1541
87 H38 -1.9075 7.3115 0.4864 H 1 LGD 0.1600
@BOND
1 1 13 ar
2 1 2 ar
3 2 10 1
4 2 16 ar
5 3 4 1
6 4 5 1
7 5 7 1
8 5 6 1
9 7 8 am
10 8 9 2
11 8 10 am
12 10 11 1
13 11 12 2
14 7 12 1
15 13 14 ar
16 14 17 1
17 14 15 ar
18 15 16 ar
19 18 19 1
20 17 18 1
21 19 20 1
22 20 21 1
23 21 22 1
24 17 22 1
25 23 28 ar
26 20 23 1
27 23 24 ar
28 25 26 ar
29 24 25 ar
30 26 27 ar
31 27 28 ar
32 29 30 1
33 26 29 1
34 31 35 1
35 30 31 1
36 31 32 1
37 32 33 1
38 33 34 1
39 34 35 1
40 34 36 1
41 36 37 1
42 37 41 1
43 37 38 1
44 38 39 2
45 39 40 1
46 40 41 2
47 34 42 1
48 43 49 1
49 42 43 ar
50 43 44 ar
51 44 45 ar
52 45 46 ar
53 46 47 ar
54 42 47 ar
55 45 48 1
56 1 50 1
57 3 51 1
58 3 52 1
59 3 53 1
60 4 54 1
61 4 55 1
62 5 56 1
63 6 57 1
64 6 58 1
65 6 59 1
66 11 60 1
67 13 61 1
68 15 62 1
69 16 63 1
70 18 64 1
71 18 65 1
72 19 66 1
73 19 67 1
74 21 68 1
75 21 69 1
76 22 70 1
77 22 71 1
78 24 72 1
79 25 73 1
80 27 74 1
81 28 75 1
82 30 76 1
83 30 77 1
84 31 78 1
85 32 79 1
86 32 80 1
87 36 81 1
88 36 82 1
89 38 83 1
90 40 84 1
91 44 85 1
92 46 86 1
93 47 87 1