@COMMENT
LIGANDBOX_ID = PDB_LDY-01
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C5H10O5
MOLECULAR_WEIGHT = 150.130
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 80
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 80
NUM_OF_DONOR = 4
NUM_OF_ACCEPTOR = 5
NUM_OF_CHIRAL_ATOMS = 4
TPSA = 90.1500
HOMO = -10.5814
LUMO = 1.8884
mLOGD = 0.881
mLOGPA = -5.506
mLOGS = -1.033
@MOLECULE
PDB_LDY-01
20 20 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 1.1210 -1.3420 0.5290 C.3 1 LGD 0.1079
2 O1 -0.2440 -1.4530 0.0660 O.3 1 LGD -0.4714
3 C2 -1.0700 -0.3100 0.3710 C.3 1 LGD 0.3087
4 C3 -0.4960 0.9210 -0.3840 C.3 1 LGD 0.0792
5 O2 -1.2510 2.0990 -0.0850 O.3 1 LGD -0.6059
6 C4 1.0030 1.1400 -0.0330 C.3 1 LGD 0.1272
7 O3 1.1300 1.5670 1.3270 O.3 1 LGD -0.6101
8 C5 1.8040 -0.1750 -0.2320 C.3 1 LGD 0.1148
9 O4 1.8830 -0.4930 -1.6220 O.3 1 LGD -0.5918
10 O5 -2.3900 -0.5940 -0.0730 O.3 1 LGD -0.5997
11 H1 1.1460 -1.1570 1.6110 H 1 LGD 0.0717
12 H2 1.6610 -2.2770 0.3310 H 1 LGD 0.0717
13 H3 -1.0760 -0.1310 1.4540 H 1 LGD 0.0561
14 H4 -0.5670 0.7150 -1.4600 H 1 LGD 0.0637
15 H5 -2.1910 1.8620 -0.1880 H 1 LGD 0.4305
16 H6 1.4140 1.9100 -0.6980 H 1 LGD 0.0707
17 H7 0.4670 2.2700 1.4590 H 1 LGD 0.4300
18 H8 2.8170 -0.0320 0.1660 H 1 LGD 0.0947
19 H9 1.1440 -1.0990 -1.8140 H 1 LGD 0.4179
20 H10 -2.5180 -1.5500 0.0530 H 1 LGD 0.4341
@BOND
1 1 2 1
2 2 3 1
3 3 10 1
4 3 4 1
5 4 5 1
6 4 6 1
7 6 8 1
8 6 7 1
9 1 8 1
10 8 9 1
11 1 11 1
12 1 12 1
13 3 13 1
14 4 14 1
15 5 15 1
16 6 16 1
17 7 17 1
18 8 18 1
19 9 19 1
20 10 20 1