@COMMENT
LIGANDBOX_ID = PDB_LYA-02
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C20H21N5O6
MOLECULAR_WEIGHT = 427.417
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 224
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 224
NUM_OF_DONOR = 7
NUM_OF_ACCEPTOR = 7
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 186.9700
HOMO = -1.2909
LUMO = 2.3732
mLOGPA = -6.496
mLOGD = -1.627
mLOGS = -1.427
@MOLECULE
PDB_LYA-02
50 52 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.8385 0.8739 0.5744 C.ar 1 LGD -0.0985
2 C2 -0.4119 1.8301 1.5115 C.ar 1 LGD -0.1471
3 C3 0.9295 1.8694 1.9239 C.ar 1 LGD -0.0947
4 C4 1.8678 0.9524 1.4065 C.ar 1 LGD -0.1004
5 C5 1.4344 -0.0030 0.4623 C.ar 1 LGD -0.0947
6 C6 0.0924 -0.0402 0.0520 C.ar 1 LGD -0.1471
7 C7 -2.2944 0.8170 0.1309 C.3 1 LGD -0.0173
8 C8 -3.0632 -0.3241 0.8335 C.3 1 LGD -0.0146
9 C9 -4.4634 -0.4735 0.2954 C.ar 1 LGD -0.0657
10 C10 -5.6255 -0.1290 0.9562 C.ar 1 LGD -0.1612
11 N1 -6.6795 -0.5919 0.1574 N.ar 1 LGD -0.2230
12 C11 -6.1223 -1.0045 -1.0372 C.ar 1 LGD 0.1444
13 C12 -4.7860 -1.1325 -0.9179 C.ar 1 LGD -0.2467
14 C13 -3.9761 -1.8589 -1.8879 C.2 1 LGD 0.7792
15 O1 -2.7599 -1.9203 -1.8811 O.2 1 LGD -0.5121
16 N2 -4.7632 -2.5098 -2.8326 N.2 1 LGD -0.7994
17 C14 -6.0919 -2.5678 -2.8215 C.2 1 LGD 0.8755
18 N3 -6.8103 -1.9562 -1.7803 N.pl3 1 LGD -0.7657
19 N4 -6.7419 -3.3078 -3.7624 N.pl3 1 LGD -0.9280
20 C15 3.3057 1.0062 1.8614 C.2 1 LGD 0.6515
21 O2 3.6673 1.7818 2.7314 O.2 1 LGD -0.6451
22 N5 4.2335 0.1540 1.2789 N.am 1 LGD -0.5279
23 C16 5.6760 0.1899 1.5854 C.3 1 LGD -0.0322
24 C17 6.3518 1.4102 0.8949 C.3 1 LGD -0.0501
25 C18 6.2438 1.4002 -0.6529 C.3 1 LGD -0.2088
26 C19 6.8419 2.6704 -1.2676 C.2 1 LGD 0.9341
27 O3 6.0622 3.5250 -1.6517 O.co2 1 LGD -0.8701
28 O4 8.0563 2.7319 -1.3509 O.co2 1 LGD -0.8701
29 C20 6.3599 -1.1400 1.1967 C.2 1 LGD 0.9466
30 O5 5.8070 -1.8486 0.3702 O.co2 1 LGD -0.8469
31 O6 7.4012 -1.4115 1.7695 O.co2 1 LGD -0.8469
32 H1 -1.1198 2.5437 1.9238 H 1 LGD 0.1231
33 H2 1.2375 2.6182 2.6484 H 1 LGD 0.1509
34 H3 2.1277 -0.7249 0.0413 H 1 LGD 0.1509
35 H4 -0.2259 -0.7845 -0.6729 H 1 LGD 0.1231
36 H5 -2.7966 1.7711 0.3368 H 1 LGD 0.0422
37 H6 -2.3408 0.6759 -0.9564 H 1 LGD 0.0422
38 H7 -2.5159 -1.2675 0.7147 H 1 LGD 0.0576
39 H8 -3.0952 -0.1232 1.9120 H 1 LGD 0.0576
40 H9 -5.7834 0.3198 1.9283 H 1 LGD 0.1748
41 H10 -7.6600 -0.6002 0.3977 H 1 LGD 0.2919
42 H11 -7.7995 -2.1102 -1.6636 H 1 LGD 0.4292
43 H12 -6.1985 -3.5795 -4.5672 H 1 LGD 0.4361
44 H13 -7.7281 -3.1410 -3.8836 H 1 LGD 0.4361
45 H14 3.9176 -0.5111 0.5884 H 1 LGD 0.3189
46 H15 5.8002 0.2977 2.6707 H 1 LGD 0.0366
47 H16 5.9041 2.3360 1.2776 H 1 LGD 0.0331
48 H17 7.4109 1.4410 1.1812 H 1 LGD 0.0331
49 H18 6.7693 0.5289 -1.0641 H 1 LGD 0.0228
50 H19 5.1936 1.3188 -0.9617 H 1 LGD 0.0228
@BOND
1 1 2 ar
2 1 6 ar
3 1 7 1
4 2 3 ar
5 3 4 ar
6 4 5 ar
7 4 20 1
8 5 6 ar
9 7 8 1
10 8 9 1
11 9 10 2
12 9 13 1
13 10 11 1
14 11 12 1
15 12 13 2
16 12 18 1
17 13 14 1
18 14 15 2
19 14 16 1
20 16 17 2
21 17 18 1
22 17 19 1
23 20 21 2
24 20 22 am
25 22 23 1
26 23 24 1
27 23 29 1
28 24 25 1
29 25 26 1
30 26 27 2
31 26 28 1
32 29 30 2
33 29 31 1
34 2 32 1
35 3 33 1
36 5 34 1
37 6 35 1
38 7 36 1
39 7 37 1
40 8 38 1
41 8 39 1
42 10 40 1
43 11 41 1
44 18 42 1
45 19 43 1
46 19 44 1
47 22 45 1
48 23 46 1
49 24 47 1
50 24 48 1
51 25 49 1
52 25 50 1