@COMMENT
LIGANDBOX_ID = PDB_LYS-01
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C6H14N2O2
MOLECULAR_WEIGHT = 146.190
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 80
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 80
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 2
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 89.3400
HOMO = -11.4038
LUMO = -3.9256
mLOGS = 2.337
mLOGPA = -4.803
mLOGD = -2.126
@MOLECULE
PDB_LYS-01
25 24 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 N1 3.1020 -1.0130 0.2590 N.4 1 LGD -0.7912
2 C1 1.7620 -0.7980 -0.3190 C.3 1 LGD -0.0186
3 C2 1.5390 0.7010 -0.5850 C.2 1 LGD 0.8580
4 O1 1.2520 1.1540 -1.6780 O.co2 1 LGD -0.7674
5 C3 0.6950 -1.4140 0.6310 C.3 1 LGD -0.0776
6 C4 -0.7430 -1.4240 0.0400 C.3 1 LGD -0.0473
7 C5 -1.5670 -0.1570 0.3820 C.3 1 LGD -0.1131
8 C6 -3.0020 -0.2400 -0.1840 C.3 1 LGD 0.0847
9 N2 -3.7530 0.9730 0.1620 N.4 1 LGD -0.8144
10 O2 1.7510 1.4970 0.4880 O.co2 1 LGD -0.7674
11 H1 3.2340 -1.9990 0.4360 H 1 LGD 0.4505
12 H2 3.7960 -0.5970 -0.3470 H 1 LGD 0.4505
13 H3 1.7150 -1.3130 -1.2870 H 1 LGD 0.0941
14 H4 0.9800 -2.4550 0.8350 H 1 LGD 0.0570
15 H5 0.7020 -0.9020 1.6020 H 1 LGD 0.0570
16 H6 -0.7010 -1.5620 -1.0480 H 1 LGD 0.0583
17 H7 -1.2740 -2.2980 0.4410 H 1 LGD 0.0583
18 H8 -1.6130 -0.0320 1.4720 H 1 LGD 0.0848
19 H9 -1.0760 0.7360 -0.0220 H 1 LGD 0.0848
20 H10 -2.9630 -0.3470 -1.2750 H 1 LGD 0.1105
21 H11 -3.5140 -1.1170 0.2330 H 1 LGD 0.1105
22 H12 -3.2550 1.7820 -0.1830 H 1 LGD 0.4625
23 H13 -4.7010 0.8850 -0.1740 H 1 LGD 0.4625
24 H14 3.1242 -0.6279 1.1816 H 1 LGD 0.4505
25 H15 -3.7111 1.1107 1.1516 H 1 LGD 0.4625
@BOND
1 1 2 1
2 2 3 1
3 2 5 1
4 3 4 2
5 3 10 1
6 5 6 1
7 6 7 1
8 7 8 1
9 8 9 1
10 1 11 1
11 1 12 1
12 2 13 1
13 5 14 1
14 5 15 1
15 6 16 1
16 6 17 1
17 7 18 1
18 7 19 1
19 8 20 1
20 8 21 1
21 9 22 1
22 9 23 1
23 1 24 1
24 9 25 1