@COMMENT
LIGANDBOX_ID = PDB_LYS-02
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C6H14N2O2
MOLECULAR_WEIGHT = 146.190
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 80
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 80
NUM_OF_DONOR = 5
NUM_OF_ACCEPTOR = 2
NUM_OF_CHIRAL_ATOMS = 1
TPSA = 89.3400
HOMO = -11.4038
LUMO = -3.9256
mLOGS = 2.337
mLOGPA = -4.803
mLOGD = -2.126
@MOLECULE
PDB_LYS-02
25 24 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 N1 2.3743 -1.0637 -1.3958 N.4 1 LGD -0.7974
2 C1 2.2912 -0.3280 -0.1133 C.3 1 LGD -0.0658
3 C2 2.0451 1.1769 -0.3363 C.2 1 LGD 0.9229
4 O1 1.6021 1.5234 -1.4187 O.co2 1 LGD -0.7652
5 C3 1.2198 -0.9815 0.8061 C.3 1 LGD -0.0814
6 C4 -0.2327 -0.9809 0.2461 C.3 1 LGD -0.0606
7 C5 -1.0363 0.2966 0.5941 C.3 1 LGD -0.1137
8 C6 -2.4732 0.2211 0.0425 C.3 1 LGD 0.0948
9 N2 -3.1941 1.4595 0.3876 N.4 1 LGD -0.8177
10 O2 2.3356 1.9212 0.5819 O.co2 1 LGD -0.7652
11 H1 3.1279 -0.6829 -1.9510 H 1 LGD 0.4433
12 H2 2.5356 -2.0457 -1.2248 H 1 LGD 0.4433
13 H3 3.2604 -0.4093 0.3820 H 1 LGD 0.1103
14 H4 1.5198 -2.0221 0.9844 H 1 LGD 0.0738
15 H5 1.2377 -0.4942 1.7897 H 1 LGD 0.0738
16 H6 -0.2262 -1.1327 -0.8405 H 1 LGD 0.0412
17 H7 -0.7630 -1.8430 0.6715 H 1 LGD 0.0412
18 H8 -1.0680 0.4255 1.6838 H 1 LGD 0.0890
19 H9 -0.5444 1.1834 0.1796 H 1 LGD 0.0890
20 H10 -2.4477 0.1088 -1.0436 H 1 LGD 0.1071
21 H11 -2.9940 -0.6358 0.4750 H 1 LGD 0.1071
22 H12 -2.7169 2.2539 -0.0161 H 1 LGD 0.4623
23 H13 -4.1371 1.4187 0.0266 H 1 LGD 0.4623
24 H14 1.5098 -0.9373 -1.9036 H 1 LGD 0.4433
25 H15 -3.2257 1.5670 1.3918 H 1 LGD 0.4623
@BOND
1 1 2 1
2 2 3 1
3 2 5 1
4 3 4 2
5 3 10 1
6 5 6 1
7 6 7 1
8 7 8 1
9 8 9 1
10 1 11 1
11 1 12 1
12 2 13 1
13 5 14 1
14 5 15 1
15 6 16 1
16 6 17 1
17 7 18 1
18 7 19 1
19 8 20 1
20 8 21 1
21 9 22 1
22 9 23 1
23 1 24 1
24 9 25 1