@COMMENT
LIGANDBOX_ID = PDB_RAP-01
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C51H79NO13
MOLECULAR_WEIGHT = 914.187
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 496
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 496
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 15
TPSA = 195.4300
HOMO = -8.5011
LUMO = -0.2260
mLOGD = 3.054
mLOGS = -3.666
mLOGPA = -5.250
@MOLECULE
PDB_RAP-01
144 147 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.4600 -3.4140 2.2580 C.2 1 LGD 0.6191
2 O1 -0.9800 -2.3650 1.5480 O.3 1 LGD -0.4388
3 O2 -0.5850 -3.5580 3.4630 O.2 1 LGD -0.5209
4 C2 0.2860 -4.3960 1.3270 C.3 1 LGD 0.0663
5 C3 0.2820 -5.8530 1.8750 C.3 1 LGD -0.0666
6 C4 1.3460 -6.1050 2.9610 C.3 1 LGD -0.0827
7 C5 2.7290 -5.6700 2.4510 C.3 1 LGD -0.0876
8 C6 2.7260 -4.1930 2.0070 C.3 1 LGD 0.1004
9 N1 1.6530 -3.8660 1.0210 N.am 1 LGD -0.4747
10 C7 1.7870 -2.8710 0.0360 C.2 1 LGD 0.5909
11 O3 0.8720 -2.5390 -0.7020 O.2 1 LGD -0.5671
12 C8 3.1910 -2.1860 -0.1270 C.2 1 LGD 0.4799
13 O4 4.1510 -2.8500 -0.4890 O.2 1 LGD -0.4460
14 C9 3.2510 -0.6400 0.0410 C.3 1 LGD 0.2894
15 O5 4.5160 -0.1780 -0.4950 O.3 1 LGD -0.4142
16 O6 2.1920 -0.0450 -0.7200 O.3 1 LGD -0.6137
17 C10 3.1970 -0.1870 1.5470 C.3 1 LGD -0.0934
18 C11 3.4990 1.3340 1.6930 C.3 1 LGD -0.0656
19 C12 4.7820 1.7440 0.9390 C.3 1 LGD -0.1088
20 C13 4.7320 1.2510 -0.5230 C.3 1 LGD 0.1574
21 C14 6.0510 1.5170 -1.2860 C.3 1 LGD -0.0917
22 C15 5.9970 0.9900 -2.7490 C.3 1 LGD 0.1904
23 O7 7.2600 1.2490 -3.4060 O.3 1 LGD -0.4309
24 C16 4.8820 1.6460 -3.5640 C.2 1 LGD -0.0922
25 C17 3.7630 0.9570 -3.8950 C.2 1 LGD -0.1318
26 C18 2.6680 1.4610 -4.7290 C.2 1 LGD -0.1066
27 C19 1.5840 0.7290 -5.0760 C.2 1 LGD -0.1394
28 C20 0.5380 1.1950 -5.9840 C.2 1 LGD -0.1287
29 C21 -0.4970 0.4290 -6.3850 C.2 1 LGD -0.1689
30 C22 -1.5400 0.8680 -7.4000 C.3 1 LGD -0.0320
31 C23 -2.9520 0.9610 -6.7620 C.3 1 LGD -0.0580
32 C24 -3.0920 2.1200 -5.7260 C.3 1 LGD -0.1661
33 C25 -3.4330 1.5580 -4.3310 C.2 1 LGD 0.5323
34 O8 -4.5550 1.1600 -4.0630 O.2 1 LGD -0.5003
35 C26 -2.2650 1.4640 -3.3240 C.3 1 LGD 0.0241
36 O9 -2.5000 0.4080 -2.3600 O.3 1 LGD -0.4103
37 C27 -2.1050 2.7870 -2.5210 C.3 1 LGD 0.1955
38 O10 -1.7910 3.8880 -3.3770 O.3 1 LGD -0.5899
39 C28 -1.0510 2.6340 -1.4260 C.2 1 LGD -0.0796
40 C29 -1.4310 2.4980 -0.1440 C.2 1 LGD -0.1614
41 C30 -0.5410 2.1500 1.0370 C.3 1 LGD -0.1229
42 C31 -1.2470 1.1410 1.9670 C.2 1 LGD 0.5690
43 O11 -1.3430 1.3230 3.1690 O.2 1 LGD -0.5280
44 C32 -1.8220 -0.1120 1.2740 C.3 1 LGD -0.1807
45 C33 -1.8490 -1.3930 2.1730 C.3 1 LGD 0.1670
46 C34 -3.2700 -2.0430 2.3380 C.3 1 LGD -0.0809
47 C35 -4.2820 -1.1430 3.1160 C.3 1 LGD -0.0625
48 C36 -3.8600 -0.7380 4.5640 C.3 1 LGD -0.0670
49 C37 -4.9120 0.2310 5.1740 C.3 1 LGD -0.0950
50 C38 -4.5510 0.6490 6.6250 C.3 1 LGD 0.1097
51 O12 -5.6280 1.4300 7.1920 O.3 1 LGD -0.4448
52 C39 -4.3500 -0.5920 7.5280 C.3 1 LGD 0.1539
53 O13 -3.9700 -0.1810 8.8390 O.3 1 LGD -0.6051
54 C40 -3.2840 -1.5450 6.9410 C.3 1 LGD -0.0720
55 C41 -3.6280 -1.9660 5.4920 C.3 1 LGD -0.0764
56 C42 1.8650 -0.5310 2.2660 C.3 1 LGD -0.1039
57 C43 5.1220 3.0910 -3.9880 C.3 1 LGD -0.0523
58 C44 -1.5430 -0.1080 -8.5990 C.3 1 LGD -0.0861
59 C45 -4.1480 3.1610 -6.1740 C.3 1 LGD -0.0825
60 C46 0.3980 2.5810 -1.9160 C.3 1 LGD -0.0566
61 C47 -0.0860 3.4310 1.7760 C.3 1 LGD -0.0756
62 C48 -3.8820 -2.4870 0.9790 C.3 1 LGD -0.0911
63 C49 8.3410 0.3590 -3.0700 C.3 1 LGD 0.1276
64 C50 -2.3480 -0.9300 -2.8670 C.3 1 LGD 0.1205
65 C51 -5.7500 2.7820 6.7110 C.3 1 LGD 0.1290
66 H1 -0.2930 -4.4190 0.3940 H 1 LGD 0.0967
67 H2 -0.7140 -6.1080 2.2590 H 1 LGD 0.0595
68 H3 0.4740 -6.5370 1.0380 H 1 LGD 0.0595
69 H4 1.0970 -5.5530 3.8760 H 1 LGD 0.0579
70 H5 1.3640 -7.1700 3.2240 H 1 LGD 0.0579
71 H6 3.4790 -5.8180 3.2380 H 1 LGD 0.0552
72 H7 3.0240 -6.3040 1.6050 H 1 LGD 0.0552
73 H8 2.5860 -3.5710 2.8990 H 1 LGD 0.0547
74 H9 3.7160 -3.9670 1.5990 H 1 LGD 0.0547
75 H10 1.4400 -0.6660 -0.7110 H 1 LGD 0.4442
76 H11 3.9960 -0.7210 2.0780 H 1 LGD 0.0606
77 H12 2.6550 1.9190 1.3040 H 1 LGD 0.0501
78 H13 3.6030 1.5960 2.7540 H 1 LGD 0.0501
79 H14 4.8940 2.8350 0.9630 H 1 LGD 0.0510
80 H15 5.6570 1.3160 1.4460 H 1 LGD 0.0510
81 H16 3.9100 1.7560 -1.0470 H 1 LGD 0.0669
82 H17 6.2610 2.5940 -1.2870 H 1 LGD 0.0575
83 H18 6.8730 1.0340 -0.7450 H 1 LGD 0.0575
84 H19 5.8230 -0.0940 -2.7260 H 1 LGD 0.0592
85 H20 3.6550 -0.0710 -3.5530 H 1 LGD 0.1310
86 H21 2.7720 2.4720 -5.1170 H 1 LGD 0.1213
87 H22 1.4790 -0.2890 -4.7040 H 1 LGD 0.1228
88 H23 0.6490 2.2060 -6.3740 H 1 LGD 0.1230
89 H24 -0.6060 -0.5880 -6.0120 H 1 LGD 0.1210
90 H25 -1.2750 1.8600 -7.7910 H 1 LGD 0.0513
91 H26 -3.6940 1.0930 -7.5610 H 1 LGD 0.0496
92 H27 -3.1950 0.0000 -6.2890 H 1 LGD 0.0496
93 H28 -2.1320 2.6450 -5.6560 H 1 LGD 0.0717
94 H29 -1.3380 1.2680 -3.8750 H 1 LGD 0.0791
95 H30 -3.0720 2.9880 -2.0410 H 1 LGD 0.0455
96 H31 -2.6240 4.2040 -3.7700 H 1 LGD 0.4069
97 H32 -2.4900 2.5500 0.1050 H 1 LGD 0.1222
98 H33 0.3550 1.6370 0.6750 H 1 LGD 0.0790
99 H34 -2.8270 0.1480 0.9240 H 1 LGD 0.0892
100 H35 -1.2370 -0.3110 0.3660 H 1 LGD 0.0892
101 H36 -1.4440 -1.1470 3.1620 H 1 LGD 0.0773
102 H37 -3.1470 -2.9650 2.9190 H 1 LGD 0.0580
103 H38 -4.4730 -0.2320 2.5350 H 1 LGD 0.0413
104 H39 -5.2440 -1.6680 3.1720 H 1 LGD 0.0413
105 H40 -2.9160 -0.1850 4.5110 H 1 LGD 0.0646
106 H41 -4.9820 1.1220 4.5380 H 1 LGD 0.0463
107 H42 -5.9010 -0.2460 5.1680 H 1 LGD 0.0463
108 H43 -3.6210 1.2340 6.6160 H 1 LGD 0.0536
109 H44 -5.3030 -1.1340 7.5800 H 1 LGD 0.0424
110 H45 -4.5210 0.5950 9.0480 H 1 LGD 0.4182
111 H46 -2.3030 -1.0510 6.9490 H 1 LGD 0.0546
112 H47 -3.1990 -2.4400 7.5710 H 1 LGD 0.0546
113 H48 -4.5250 -2.5990 5.5000 H 1 LGD 0.0468
114 H49 -2.8050 -2.5820 5.1100 H 1 LGD 0.0468
115 H50 1.0070 -0.3770 1.6080 H 1 LGD 0.0435
116 H51 1.8500 -1.5720 2.5960 H 1 LGD 0.0435
117 H52 1.7230 0.0890 3.1600 H 1 LGD 0.0435
118 H53 4.2740 3.7270 -3.7070 H 1 LGD 0.0431
119 H54 6.0120 3.5220 -3.5140 H 1 LGD 0.0431
120 H55 5.2620 3.1610 -5.0740 H 1 LGD 0.0431
121 H56 -1.8220 -1.1210 -8.2810 H 1 LGD 0.0375
122 H57 -2.2550 0.2180 -9.3680 H 1 LGD 0.0375
123 H58 -0.5480 -0.1570 -9.0600 H 1 LGD 0.0375
124 H59 -4.2280 3.9730 -5.4400 H 1 LGD 0.0403
125 H60 -3.8700 3.6040 -7.1390 H 1 LGD 0.0403
126 H61 -5.1390 2.7010 -6.2820 H 1 LGD 0.0403
127 H62 0.5850 1.6610 -2.4830 H 1 LGD 0.0496
128 H63 0.6270 3.4240 -2.5790 H 1 LGD 0.0496
129 H64 1.1270 2.6300 -1.1010 H 1 LGD 0.0496
130 H65 0.5980 3.1850 2.5990 H 1 LGD 0.0424
131 H66 0.4400 4.1060 1.0910 H 1 LGD 0.0424
132 H67 -0.9470 3.9680 2.1920 H 1 LGD 0.0424
133 H68 -3.1960 -3.1450 0.4300 H 1 LGD 0.0378
134 H69 -4.8120 -3.0470 1.1420 H 1 LGD 0.0378
135 H70 -4.1180 -1.6300 0.3370 H 1 LGD 0.0378
136 H71 8.0550 -0.6830 -3.2640 H 1 LGD 0.0312
137 H72 9.2200 0.5960 -3.6810 H 1 LGD 0.0312
138 H73 8.6190 0.4610 -2.0140 H 1 LGD 0.0312
139 H74 -1.3350 -1.0770 -3.2630 H 1 LGD 0.0377
140 H75 -2.5140 -1.6540 -2.0600 H 1 LGD 0.0377
141 H76 -3.0750 -1.1260 -3.6650 H 1 LGD 0.0377
142 H77 -6.0130 2.7950 5.6460 H 1 LGD 0.0319
143 H78 -6.5410 3.3020 7.2650 H 1 LGD 0.0319
144 H79 -4.8090 3.3270 6.8550 H 1 LGD 0.0319
@BOND
1 1 2 1
2 1 3 2
3 1 4 1
4 2 45 1
5 4 5 1
6 4 9 1
7 5 6 1
8 6 7 1
9 7 8 1
10 8 9 1
11 9 10 am
12 10 11 2
13 10 12 1
14 12 13 2
15 12 14 1
16 14 15 1
17 14 16 1
18 14 17 1
19 15 20 1
20 17 18 1
21 17 56 1
22 18 19 1
23 19 20 1
24 20 21 1
25 21 22 1
26 22 23 1
27 22 24 1
28 23 63 1
29 24 25 2
30 24 57 1
31 25 26 1
32 26 27 2
33 27 28 1
34 28 29 2
35 29 30 1
36 30 31 1
37 30 58 1
38 31 32 1
39 32 33 1
40 32 59 1
41 33 34 2
42 33 35 1
43 35 36 1
44 35 37 1
45 36 64 1
46 37 38 1
47 37 39 1
48 39 40 2
49 39 60 1
50 40 41 1
51 41 42 1
52 41 61 1
53 42 43 2
54 42 44 1
55 44 45 1
56 45 46 1
57 46 47 1
58 46 62 1
59 47 48 1
60 48 49 1
61 48 55 1
62 49 50 1
63 50 51 1
64 50 52 1
65 51 65 1
66 52 53 1
67 52 54 1
68 54 55 1
69 4 66 1
70 5 67 1
71 5 68 1
72 6 69 1
73 6 70 1
74 7 71 1
75 7 72 1
76 8 73 1
77 8 74 1
78 16 75 1
79 17 76 1
80 18 77 1
81 18 78 1
82 19 79 1
83 19 80 1
84 20 81 1
85 21 82 1
86 21 83 1
87 22 84 1
88 25 85 1
89 26 86 1
90 27 87 1
91 28 88 1
92 29 89 1
93 30 90 1
94 31 91 1
95 31 92 1
96 32 93 1
97 35 94 1
98 37 95 1
99 38 96 1
100 40 97 1
101 41 98 1
102 44 99 1
103 44 100 1
104 45 101 1
105 46 102 1
106 47 103 1
107 47 104 1
108 48 105 1
109 49 106 1
110 49 107 1
111 50 108 1
112 52 109 1
113 53 110 1
114 54 111 1
115 54 112 1
116 55 113 1
117 55 114 1
118 56 115 1
119 56 116 1
120 56 117 1
121 57 118 1
122 57 119 1
123 57 120 1
124 58 121 1
125 58 122 1
126 58 123 1
127 59 124 1
128 59 125 1
129 59 126 1
130 60 127 1
131 60 128 1
132 60 129 1
133 61 130 1
134 61 131 1
135 61 132 1
136 62 133 1
137 62 134 1
138 62 135 1
139 63 136 1
140 63 137 1
141 63 138 1
142 64 139 1
143 64 140 1
144 64 141 1
145 65 142 1
146 65 143 1
147 65 144 1