@COMMENT
LIGANDBOX_ID = PDB_RAP-02
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C51H79NO13
MOLECULAR_WEIGHT = 914.187
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 496
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 496
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 15
TPSA = 195.4300
HOMO = -8.5011
LUMO = -0.2260
mLOGD = 3.054
mLOGS = -3.666
mLOGPA = -5.250
@MOLECULE
PDB_RAP-02
144 147 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -0.7884 -3.0245 2.1964 C.2 1 LGD 0.6307
2 O1 -0.7069 -1.6519 2.1776 O.3 1 LGD -0.4434
3 O2 -1.5914 -3.6549 2.8622 O.2 1 LGD -0.5240
4 C2 0.1922 -3.7067 1.2062 C.3 1 LGD 0.0676
5 C3 0.3395 -5.2359 1.4615 C.3 1 LGD -0.0733
6 C4 1.2677 -5.5407 2.6535 C.3 1 LGD -0.0813
7 C5 2.6384 -4.8742 2.4318 C.3 1 LGD -0.0939
8 C6 2.4912 -3.3541 2.2016 C.3 1 LGD 0.1086
9 N1 1.5133 -3.0115 1.1304 N.am 1 LGD -0.4755
10 C7 1.7121 -2.0078 0.1668 C.2 1 LGD 0.6002
11 O3 0.8189 -1.6119 -0.5661 O.2 1 LGD -0.5794
12 C8 3.1667 -1.4230 0.0018 C.2 1 LGD 0.4810
13 O4 4.0837 -2.1688 -0.3055 O.2 1 LGD -0.4469
14 C9 3.3377 0.1207 0.0811 C.3 1 LGD 0.2918
15 O5 4.5768 0.4936 -0.5741 O.3 1 LGD -0.4163
16 O6 2.2484 0.7508 -0.6026 O.3 1 LGD -0.6163
17 C10 3.4524 0.6246 1.5596 C.3 1 LGD -0.0948
18 C11 3.7737 2.1425 1.6163 C.3 1 LGD -0.0648
19 C12 5.0084 2.4786 0.7590 C.3 1 LGD -0.1089
20 C13 4.8526 1.9140 -0.6716 C.3 1 LGD 0.1588
21 C14 6.1410 2.1012 -1.5033 C.3 1 LGD -0.0941
22 C15 5.9980 1.5544 -2.9511 C.3 1 LGD 0.1918
23 O7 7.2226 1.7922 -3.6816 O.3 1 LGD -0.4309
24 C16 4.8472 2.2137 -3.7120 C.2 1 LGD -0.0912
25 C17 3.7160 1.5272 -4.0039 C.2 1 LGD -0.1304
26 C18 2.5920 2.0391 -4.7937 C.2 1 LGD -0.1059
27 C19 1.4953 1.3117 -5.1111 C.2 1 LGD -0.1387
28 C20 0.4323 1.7830 -5.9966 C.2 1 LGD -0.1277
29 C21 -0.6101 1.0190 -6.3843 C.2 1 LGD -0.1699
30 C22 -1.6578 1.4595 -7.3935 C.3 1 LGD -0.0322
31 C23 -3.0676 1.5600 -6.7528 C.3 1 LGD -0.0576
32 C24 -3.2028 2.7255 -5.7235 C.3 1 LGD -0.1673
33 C25 -3.5270 2.1699 -4.3238 C.2 1 LGD 0.5301
34 O8 -4.6476 1.7796 -4.0380 O.2 1 LGD -0.4963
35 C26 -2.3512 2.0687 -3.3307 C.3 1 LGD 0.0200
36 O9 -2.6027 1.0205 -2.3662 O.3 1 LGD -0.4053
37 C27 -2.1646 3.3937 -2.5372 C.3 1 LGD 0.1963
38 O10 -1.7478 4.4582 -3.3929 O.3 1 LGD -0.5898
39 C28 -1.1863 3.2035 -1.3792 C.2 1 LGD -0.0800
40 C29 -1.6572 3.0180 -0.1346 C.2 1 LGD -0.1572
41 C30 -0.8629 2.6480 1.1075 C.3 1 LGD -0.1179
42 C31 -1.7570 1.8035 2.0440 C.2 1 LGD 0.5772
43 O11 -2.3176 2.2959 3.0085 O.2 1 LGD -0.5212
44 C32 -1.9821 0.3350 1.6154 C.3 1 LGD -0.1832
45 C33 -1.8023 -0.8257 2.6666 C.3 1 LGD 0.1791
46 C34 -1.6317 -0.4359 4.1916 C.3 1 LGD -0.0728
47 C35 -1.8383 -1.6136 5.1942 C.3 1 LGD -0.0666
48 C36 -3.2492 -2.2795 5.2055 C.3 1 LGD -0.0580
49 C37 -3.2085 -3.5505 6.0980 C.3 1 LGD -0.0963
50 C38 -4.5899 -4.2499 6.1920 C.3 1 LGD 0.1104
51 O12 -4.5239 -5.3343 7.1457 O.3 1 LGD -0.4446
52 C39 -5.6794 -3.2616 6.6782 C.3 1 LGD 0.1550
53 O13 -6.9474 -3.9114 6.7078 O.3 1 LGD -0.6055
54 C40 -5.7451 -2.0091 5.7733 C.3 1 LGD -0.0716
55 C41 -4.3703 -1.3057 5.6700 C.3 1 LGD -0.0774
56 C42 2.2157 0.3218 2.4220 C.3 1 LGD -0.1014
57 C43 5.0637 3.6652 -4.1287 C.3 1 LGD -0.0527
58 C44 -1.6668 0.4805 -8.5903 C.3 1 LGD -0.0861
59 C45 -4.2706 3.7579 -6.1664 C.3 1 LGD -0.0841
60 C46 0.2918 3.1643 -1.7674 C.3 1 LGD -0.0556
61 C47 -0.3124 3.9163 1.8045 C.3 1 LGD -0.0768
62 C48 -0.2739 0.2298 4.5202 C.3 1 LGD -0.0841
63 C49 8.3369 0.9451 -3.3441 C.3 1 LGD 0.1277
64 C50 -2.4042 -0.3159 -2.8583 C.3 1 LGD 0.1224
65 C51 -3.7929 -6.5009 6.7231 C.3 1 LGD 0.1297
66 H1 -0.2955 -3.6148 0.2280 H 1 LGD 0.0961
67 H2 -0.6415 -5.7031 1.6156 H 1 LGD 0.0652
68 H3 0.7611 -5.7026 0.5618 H 1 LGD 0.0652
69 H4 0.8181 -5.1693 3.5838 H 1 LGD 0.0529
70 H5 1.3919 -6.6256 2.7639 H 1 LGD 0.0529
71 H6 3.2866 -5.0568 3.2982 H 1 LGD 0.0564
72 H7 3.1299 -5.3283 1.5615 H 1 LGD 0.0564
73 H8 2.1428 -2.9026 3.1387 H 1 LGD 0.0533
74 H9 3.4784 -2.9347 1.9828 H 1 LGD 0.0533
75 H10 1.4937 0.1317 -0.5926 H 1 LGD 0.4464
76 H11 4.2982 0.0972 2.0210 H 1 LGD 0.0602
77 H12 2.9107 2.7201 1.2587 H 1 LGD 0.0506
78 H13 3.9564 2.4513 2.6537 H 1 LGD 0.0506
79 H14 5.1452 3.5667 0.7202 H 1 LGD 0.0500
80 H15 5.9052 2.0560 1.2308 H 1 LGD 0.0500
81 H16 4.0251 2.4330 -1.1721 H 1 LGD 0.0686
82 H17 6.4012 3.1667 -1.5331 H 1 LGD 0.0573
83 H18 6.9633 1.5896 -0.9887 H 1 LGD 0.0573
84 H19 5.8152 0.4728 -2.9032 H 1 LGD 0.0571
85 H20 3.6218 0.4953 -3.6692 H 1 LGD 0.1293
86 H21 2.6872 3.0507 -5.1823 H 1 LGD 0.1218
87 H22 1.3986 0.2921 -4.7418 H 1 LGD 0.1220
88 H23 0.5397 2.7931 -6.3884 H 1 LGD 0.1231
89 H24 -0.7168 0.0017 -6.0108 H 1 LGD 0.1208
90 H25 -1.3913 2.4494 -7.7872 H 1 LGD 0.0510
91 H26 -3.8101 1.6903 -7.5512 H 1 LGD 0.0499
92 H27 -3.3131 0.6020 -6.2750 H 1 LGD 0.0499
93 H28 -2.2448 3.2560 -5.6659 H 1 LGD 0.0678
94 H29 -1.4300 1.8522 -3.8849 H 1 LGD 0.0788
95 H30 -3.1430 3.6602 -2.1169 H 1 LGD 0.0459
96 H31 -2.5125 4.7136 -3.9376 H 1 LGD 0.4058
97 H32 -2.7331 3.0575 0.0308 H 1 LGD 0.1259
98 H33 -0.0114 2.0246 0.8178 H 1 LGD 0.0712
99 H34 -3.0059 0.2855 1.2245 H 1 LGD 0.0800
100 H35 -1.3457 0.1289 0.7445 H 1 LGD 0.0800
101 H36 -2.7299 -1.4034 2.5818 H 1 LGD 0.0574
102 H37 -2.4070 0.2982 4.4302 H 1 LGD 0.0775
103 H38 -1.0700 -2.3749 5.0125 H 1 LGD 0.0416
104 H39 -1.6387 -1.2445 6.2090 H 1 LGD 0.0416
105 H40 -3.5044 -2.6079 4.1921 H 1 LGD 0.0572
106 H41 -2.4685 -4.2464 5.6836 H 1 LGD 0.0488
107 H42 -2.8672 -3.2816 7.1065 H 1 LGD 0.0488
108 H43 -4.8723 -4.6328 5.2022 H 1 LGD 0.0512
109 H44 -5.4173 -2.9353 7.6931 H 1 LGD 0.0423
110 H45 -6.7991 -4.7859 7.1100 H 1 LGD 0.4189
111 H46 -6.0791 -2.2978 4.7679 H 1 LGD 0.0537
112 H47 -6.4859 -1.3033 6.1705 H 1 LGD 0.0537
113 H48 -4.1072 -0.8773 6.6460 H 1 LGD 0.0445
114 H49 -4.4603 -0.4688 4.9669 H 1 LGD 0.0445
115 H50 1.2908 0.6254 1.9233 H 1 LGD 0.0430
116 H51 2.1450 -0.7431 2.6487 H 1 LGD 0.0430
117 H52 2.2841 0.8514 3.3801 H 1 LGD 0.0430
118 H53 4.2405 4.2986 -3.7749 H 1 LGD 0.0432
119 H54 5.9888 4.0857 -3.7156 H 1 LGD 0.0432
120 H55 5.1219 3.7535 -5.2206 H 1 LGD 0.0432
121 H56 -1.9507 -0.5300 -8.2695 H 1 LGD 0.0375
122 H57 -2.3775 0.8089 -9.3593 H 1 LGD 0.0375
123 H58 -0.6724 0.4258 -9.0514 H 1 LGD 0.0375
124 H59 -4.3495 4.5716 -5.4344 H 1 LGD 0.0413
125 H60 -4.0041 4.1993 -7.1352 H 1 LGD 0.0413
126 H61 -5.2587 3.2900 -6.2647 H 1 LGD 0.0413
127 H62 0.5036 2.3024 -2.4119 H 1 LGD 0.0490
128 H63 0.5839 4.0647 -2.3213 H 1 LGD 0.0490
129 H64 0.9556 3.1090 -0.8985 H 1 LGD 0.0490
130 H65 0.2592 3.6472 2.7019 H 1 LGD 0.0422
131 H66 0.3553 4.4703 1.1328 H 1 LGD 0.0422
132 H67 -1.1271 4.5886 2.1024 H 1 LGD 0.0422
133 H68 -0.0536 1.0693 3.8551 H 1 LGD 0.0342
134 H69 -0.2793 0.6260 5.5436 H 1 LGD 0.0342
135 H70 0.5403 -0.5014 4.4535 H 1 LGD 0.0342
136 H71 8.0582 -0.1115 -3.4433 H 1 LGD 0.0311
137 H72 9.1754 1.1500 -4.0209 H 1 LGD 0.0311
138 H73 8.6730 1.1321 -2.3171 H 1 LGD 0.0311
139 H74 -1.3684 -0.4464 -3.1966 H 1 LGD 0.0357
140 H75 -2.6040 -1.0393 -2.0582 H 1 LGD 0.0357
141 H76 -3.0820 -0.5236 -3.6957 H 1 LGD 0.0357
142 H77 -2.7272 -6.2708 6.6036 H 1 LGD 0.0315
143 H78 -3.8898 -7.2918 7.4768 H 1 LGD 0.0315
144 H79 -4.1875 -6.8757 5.7703 H 1 LGD 0.0315
@BOND
1 1 2 1
2 1 3 2
3 1 4 1
4 2 45 1
5 4 5 1
6 4 9 1
7 5 6 1
8 6 7 1
9 7 8 1
10 8 9 1
11 9 10 am
12 10 11 2
13 10 12 1
14 12 13 2
15 12 14 1
16 14 15 1
17 14 16 1
18 14 17 1
19 15 20 1
20 17 18 1
21 17 56 1
22 18 19 1
23 19 20 1
24 20 21 1
25 21 22 1
26 22 23 1
27 22 24 1
28 23 63 1
29 24 25 2
30 24 57 1
31 25 26 1
32 26 27 2
33 27 28 1
34 28 29 2
35 29 30 1
36 30 31 1
37 30 58 1
38 31 32 1
39 32 33 1
40 32 59 1
41 33 34 2
42 33 35 1
43 35 36 1
44 35 37 1
45 36 64 1
46 37 38 1
47 37 39 1
48 39 40 2
49 39 60 1
50 40 41 1
51 41 42 1
52 41 61 1
53 42 43 2
54 42 44 1
55 44 45 1
56 45 46 1
57 46 47 1
58 46 62 1
59 47 48 1
60 48 49 1
61 48 55 1
62 49 50 1
63 50 51 1
64 50 52 1
65 51 65 1
66 52 53 1
67 52 54 1
68 54 55 1
69 4 66 1
70 5 67 1
71 5 68 1
72 6 69 1
73 6 70 1
74 7 71 1
75 7 72 1
76 8 73 1
77 8 74 1
78 16 75 1
79 17 76 1
80 18 77 1
81 18 78 1
82 19 79 1
83 19 80 1
84 20 81 1
85 21 82 1
86 21 83 1
87 22 84 1
88 25 85 1
89 26 86 1
90 27 87 1
91 28 88 1
92 29 89 1
93 30 90 1
94 31 91 1
95 31 92 1
96 32 93 1
97 35 94 1
98 37 95 1
99 38 96 1
100 40 97 1
101 41 98 1
102 44 99 1
103 44 100 1
104 45 101 1
105 46 102 1
106 47 103 1
107 47 104 1
108 48 105 1
109 49 106 1
110 49 107 1
111 50 108 1
112 52 109 1
113 53 110 1
114 54 111 1
115 54 112 1
116 55 113 1
117 55 114 1
118 56 115 1
119 56 116 1
120 56 117 1
121 57 118 1
122 57 119 1
123 57 120 1
124 58 121 1
125 58 122 1
126 58 123 1
127 59 124 1
128 59 125 1
129 59 126 1
130 60 127 1
131 60 128 1
132 60 129 1
133 61 130 1
134 61 131 1
135 61 132 1
136 62 133 1
137 62 134 1
138 62 135 1
139 63 136 1
140 63 137 1
141 63 138 1
142 64 139 1
143 64 140 1
144 64 141 1
145 65 142 1
146 65 143 1
147 65 144 1