@COMMENT
LIGANDBOX_ID = PDB_RAP-09
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C51H79NO13
MOLECULAR_WEIGHT = 914.187
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 496
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 496
NUM_OF_DONOR = 3
NUM_OF_ACCEPTOR = 13
NUM_OF_CHIRAL_ATOMS = 15
TPSA = 195.4300
HOMO = -8.5011
LUMO = -0.2260
mLOGD = 3.054
mLOGS = -3.666
mLOGPA = -5.250
@MOLECULE
PDB_RAP-09
144 147 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 3.2988 1.9166 -2.9134 C.2 1 LGD 0.6274
2 O1 2.0783 1.3180 -2.7493 O.3 1 LGD -0.4465
3 O2 3.8632 2.0479 -3.9874 O.2 1 LGD -0.5159
4 C2 3.8372 2.4510 -1.5668 C.3 1 LGD 0.0633
5 C3 4.8559 3.6164 -1.7330 C.3 1 LGD -0.0687
6 C4 6.2834 3.1434 -2.0826 C.3 1 LGD -0.0816
7 C5 6.7468 2.0505 -1.1011 C.3 1 LGD -0.0913
8 C6 5.7440 0.8793 -1.0665 C.3 1 LGD 0.1035
9 N1 4.3626 1.3251 -0.7388 N.am 1 LGD -0.4786
10 C7 3.5060 0.6649 0.1563 C.2 1 LGD 0.5989
11 O3 2.3837 1.0645 0.4154 O.2 1 LGD -0.5732
12 C8 4.0236 -0.6379 0.8581 C.2 1 LGD 0.4804
13 O4 4.9257 -0.5698 1.6786 O.2 1 LGD -0.4448
14 C9 3.2221 -1.9436 0.5956 C.3 1 LGD 0.2882
15 O5 3.4653 -2.8532 1.6960 O.3 1 LGD -0.4185
16 O6 1.8193 -1.6448 0.5552 O.3 1 LGD -0.6201
17 C10 3.6878 -2.6667 -0.7203 C.3 1 LGD -0.0871
18 C11 3.0598 -4.0855 -0.8405 C.3 1 LGD -0.0667
19 C12 3.2489 -4.9072 0.4522 C.3 1 LGD -0.1084
20 C13 2.7412 -4.1046 1.6685 C.3 1 LGD 0.1562
21 C14 2.9863 -4.8259 3.0120 C.3 1 LGD -0.0922
22 C15 2.3641 -4.0457 4.2072 C.3 1 LGD 0.1907
23 O7 2.7120 -4.6988 5.4487 O.3 1 LGD -0.4309
24 C16 0.8388 -3.9599 4.1200 C.2 1 LGD -0.0919
25 C17 0.2108 -2.7899 3.8457 C.2 1 LGD -0.1328
26 C18 -1.2435 -2.5970 3.8189 C.2 1 LGD -0.1098
27 C19 -1.8542 -1.4131 3.5760 C.2 1 LGD -0.1369
28 C20 -3.3015 -1.2155 3.6473 C.2 1 LGD -0.1281
29 C21 -3.9060 -0.0238 3.4619 C.2 1 LGD -0.1690
30 C22 -5.3978 0.2125 3.6417 C.3 1 LGD -0.0308
31 C23 -6.0808 0.5876 2.2998 C.3 1 LGD -0.0592
32 C24 -6.2215 -0.6100 1.3067 C.3 1 LGD -0.1647
33 C25 -5.6694 -0.2283 -0.0813 C.2 1 LGD 0.5282
34 O8 -6.3821 0.2196 -0.9650 O.2 1 LGD -0.5001
35 C26 -4.1482 -0.4022 -0.2691 C.3 1 LGD 0.0226
36 O9 -3.5985 0.7112 -1.0088 O.3 1 LGD -0.4081
37 C27 -3.8402 -1.7022 -1.0694 C.3 1 LGD 0.1963
38 O10 -4.5153 -2.8226 -0.4949 O.3 1 LGD -0.5903
39 C28 -2.3430 -2.0024 -1.1747 C.2 1 LGD -0.0802
40 C29 -1.7348 -2.0612 -2.3739 C.2 1 LGD -0.1604
41 C30 -0.2642 -2.3711 -2.6428 C.3 1 LGD -0.1245
42 C31 0.3550 -1.3898 -3.6637 C.2 1 LGD 0.5701
43 O11 1.0218 -1.7650 -4.6138 O.2 1 LGD -0.5261
44 C32 0.0672 0.0963 -3.4090 C.3 1 LGD -0.1776
45 C33 1.1953 1.0775 -3.8679 C.3 1 LGD 0.1718
46 C34 0.6433 2.4566 -4.3883 C.3 1 LGD -0.0825
47 C35 -0.5046 3.1205 -3.5407 C.3 1 LGD -0.0701
48 C36 -0.1027 3.7859 -2.1793 C.3 1 LGD -0.0498
49 C37 -1.0444 5.0001 -1.9050 C.3 1 LGD -0.1021
50 C38 -0.8179 5.6644 -0.5173 C.3 1 LGD 0.1110
51 O12 -1.8554 6.6397 -0.2696 O.3 1 LGD -0.4446
52 C39 -0.8886 4.6251 0.6265 C.3 1 LGD 0.1525
53 O13 -0.6112 5.2519 1.8761 O.3 1 LGD -0.6034
54 C40 0.1006 3.4705 0.3827 C.3 1 LGD -0.0674
55 C41 -0.1568 2.7925 -0.9801 C.3 1 LGD -0.0871
56 C42 3.4221 -1.8507 -2.0125 C.3 1 LGD -0.1010
57 C43 0.0810 -5.2570 4.3863 C.3 1 LGD -0.0532
58 C44 -5.6181 1.3212 4.6976 C.3 1 LGD -0.0867
59 C45 -7.6908 -1.0979 1.2177 C.3 1 LGD -0.0821
60 C46 -1.6499 -2.2952 0.1581 C.3 1 LGD -0.0607
61 C47 -0.1122 -3.8490 -3.0795 C.3 1 LGD -0.0767
62 C48 0.1747 2.2915 -5.8590 C.3 1 LGD -0.0925
63 C49 4.0507 -4.4727 5.9277 C.3 1 LGD 0.1277
64 C50 -3.6991 1.9872 -0.3462 C.3 1 LGD 0.1153
65 C51 -1.7654 7.8650 -1.0184 C.3 1 LGD 0.1283
66 H1 2.9682 2.8858 -1.0581 H 1 LGD 0.0990
67 H2 4.4975 4.3260 -2.4900 H 1 LGD 0.0593
68 H3 4.8994 4.1718 -0.7871 H 1 LGD 0.0593
69 H4 6.3100 2.7540 -3.1081 H 1 LGD 0.0562
70 H5 6.9751 3.9947 -2.0458 H 1 LGD 0.0562
71 H6 7.7380 1.6826 -1.3943 H 1 LGD 0.0556
72 H7 6.8450 2.4767 -0.0941 H 1 LGD 0.0556
73 H8 5.7368 0.4091 -2.0570 H 1 LGD 0.0569
74 H9 6.1009 0.1360 -0.3475 H 1 LGD 0.0569
75 H10 1.7246 -0.6818 0.4261 H 1 LGD 0.4444
76 H11 4.7746 -2.8079 -0.6490 H 1 LGD 0.0596
77 H12 1.9867 -3.9958 -1.0484 H 1 LGD 0.0508
78 H13 3.5061 -4.6255 -1.6855 H 1 LGD 0.0508
79 H14 2.7016 -5.8549 0.3719 H 1 LGD 0.0508
80 H15 4.3107 -5.1536 0.5827 H 1 LGD 0.0508
81 H16 1.6641 -3.9285 1.5534 H 1 LGD 0.0665
82 H17 2.5635 -5.8372 2.9670 H 1 LGD 0.0585
83 H18 4.0675 -4.9425 3.1531 H 1 LGD 0.0585
84 H19 2.7732 -3.0268 4.2159 H 1 LGD 0.0577
85 H20 0.8071 -1.8979 3.6599 H 1 LGD 0.1306
86 H21 -1.8541 -3.4661 4.0528 H 1 LGD 0.1205
87 H22 -1.2554 -0.5315 3.3530 H 1 LGD 0.1244
88 H23 -3.8967 -2.0880 3.9111 H 1 LGD 0.1214
89 H24 -3.3182 0.8583 3.2120 H 1 LGD 0.1228
90 H25 -5.8710 -0.7011 4.0252 H 1 LGD 0.0521
91 H26 -7.0751 1.0060 2.5052 H 1 LGD 0.0470
92 H27 -5.5136 1.4036 1.8366 H 1 LGD 0.0470
93 H28 -5.6192 -1.4508 1.6740 H 1 LGD 0.0743
94 H29 -3.6763 -0.4608 0.7194 H 1 LGD 0.0744
95 H30 -4.2342 -1.5536 -2.0831 H 1 LGD 0.0499
96 H31 -5.4621 -2.7295 -0.6999 H 1 LGD 0.4074
97 H32 -2.3153 -1.8689 -3.2751 H 1 LGD 0.1222
98 H33 0.3144 -2.2330 -1.7250 H 1 LGD 0.0843
99 H34 -0.8661 0.3106 -3.9420 H 1 LGD 0.0854
100 H35 -0.1467 0.2386 -2.3435 H 1 LGD 0.0854
101 H36 1.7699 0.6104 -4.6780 H 1 LGD 0.0805
102 H37 1.4737 3.1724 -4.4231 H 1 LGD 0.0570
103 H38 -0.9372 3.9078 -4.1718 H 1 LGD 0.0432
104 H39 -1.3329 2.4211 -3.3779 H 1 LGD 0.0432
105 H40 0.9220 4.1712 -2.2641 H 1 LGD 0.0405
106 H41 -0.8921 5.7471 -2.6939 H 1 LGD 0.0457
107 H42 -2.0896 4.6711 -1.9767 H 1 LGD 0.0457
108 H43 0.1690 6.1455 -0.4999 H 1 LGD 0.0478
109 H44 -1.9031 4.2070 0.6504 H 1 LGD 0.0363
110 H45 -1.1321 6.0745 1.8943 H 1 LGD 0.4175
111 H46 1.1308 3.8493 0.4122 H 1 LGD 0.0571
112 H47 0.0055 2.7248 1.1825 H 1 LGD 0.0571
113 H48 -1.1260 2.2889 -0.9589 H 1 LGD 0.0565
114 H49 0.5767 1.9999 -1.0951 H 1 LGD 0.0565
115 H50 2.4564 -1.3390 -1.9744 H 1 LGD 0.0438
116 H51 4.1938 -1.0933 -2.1625 H 1 LGD 0.0438
117 H52 3.4321 -2.4966 -2.8996 H 1 LGD 0.0438
118 H53 -0.5934 -5.4916 3.5532 H 1 LGD 0.0432
119 H54 0.7508 -6.1172 4.5066 H 1 LGD 0.0432
120 H55 -0.5175 -5.1778 5.3024 H 1 LGD 0.0432
121 H56 -5.1957 2.2761 4.3590 H 1 LGD 0.0380
122 H57 -6.6878 1.4696 4.8927 H 1 LGD 0.0380
123 H58 -5.1364 1.0524 5.6464 H 1 LGD 0.0380
124 H59 -7.7741 -1.9504 0.5316 H 1 LGD 0.0412
125 H60 -8.0534 -1.4188 2.2024 H 1 LGD 0.0412
126 H61 -8.3527 -0.3012 0.8537 H 1 LGD 0.0412
127 H62 -1.3872 -1.3637 0.6737 H 1 LGD 0.0505
128 H63 -2.2997 -2.8656 0.8330 H 1 LGD 0.0505
129 H64 -0.7422 -2.8976 0.0427 H 1 LGD 0.0505
130 H65 0.9413 -4.1054 -3.2476 H 1 LGD 0.0429
131 H66 -0.5049 -4.5217 -2.3064 H 1 LGD 0.0429
132 H67 -0.6636 -4.0396 -4.0091 H 1 LGD 0.0429
133 H68 0.9741 1.8653 -6.4786 H 1 LGD 0.0397
134 H69 -0.6988 1.6310 -5.9281 H 1 LGD 0.0397
135 H70 -0.0977 3.2613 -6.2944 H 1 LGD 0.0397
136 H71 4.2414 -3.3973 6.0345 H 1 LGD 0.0316
137 H72 4.1774 -4.9474 6.9083 H 1 LGD 0.0316
138 H73 4.7901 -4.9004 5.2405 H 1 LGD 0.0316
139 H74 -3.1542 1.9659 0.6066 H 1 LGD 0.0385
140 H75 -3.2722 2.7725 -0.9805 H 1 LGD 0.0385
141 H76 -4.7463 2.2481 -0.1542 H 1 LGD 0.0385
142 H77 -1.8964 7.6764 -2.0907 H 1 LGD 0.0324
143 H78 -2.5529 8.5555 -0.6922 H 1 LGD 0.0324
144 H79 -0.7915 8.3428 -0.8534 H 1 LGD 0.0324
@BOND
1 1 2 1
2 1 3 2
3 1 4 1
4 2 45 1
5 4 5 1
6 4 9 1
7 5 6 1
8 6 7 1
9 7 8 1
10 8 9 1
11 9 10 am
12 10 11 2
13 10 12 1
14 12 13 2
15 12 14 1
16 14 15 1
17 14 16 1
18 14 17 1
19 15 20 1
20 17 18 1
21 17 56 1
22 18 19 1
23 19 20 1
24 20 21 1
25 21 22 1
26 22 23 1
27 22 24 1
28 23 63 1
29 24 25 2
30 24 57 1
31 25 26 1
32 26 27 2
33 27 28 1
34 28 29 2
35 29 30 1
36 30 31 1
37 30 58 1
38 31 32 1
39 32 33 1
40 32 59 1
41 33 34 2
42 33 35 1
43 35 36 1
44 35 37 1
45 36 64 1
46 37 38 1
47 37 39 1
48 39 40 2
49 39 60 1
50 40 41 1
51 41 42 1
52 41 61 1
53 42 43 2
54 42 44 1
55 44 45 1
56 45 46 1
57 46 47 1
58 46 62 1
59 47 48 1
60 48 49 1
61 48 55 1
62 49 50 1
63 50 51 1
64 50 52 1
65 51 65 1
66 52 53 1
67 52 54 1
68 54 55 1
69 4 66 1
70 5 67 1
71 5 68 1
72 6 69 1
73 6 70 1
74 7 71 1
75 7 72 1
76 8 73 1
77 8 74 1
78 16 75 1
79 17 76 1
80 18 77 1
81 18 78 1
82 19 79 1
83 19 80 1
84 20 81 1
85 21 82 1
86 21 83 1
87 22 84 1
88 25 85 1
89 26 86 1
90 27 87 1
91 28 88 1
92 29 89 1
93 30 90 1
94 31 91 1
95 31 92 1
96 32 93 1
97 35 94 1
98 37 95 1
99 38 96 1
100 40 97 1
101 41 98 1
102 44 99 1
103 44 100 1
104 45 101 1
105 46 102 1
106 47 103 1
107 47 104 1
108 48 105 1
109 49 106 1
110 49 107 1
111 50 108 1
112 52 109 1
113 53 110 1
114 54 111 1
115 54 112 1
116 55 113 1
117 55 114 1
118 56 115 1
119 56 116 1
120 56 117 1
121 57 118 1
122 57 119 1
123 57 120 1
124 58 121 1
125 58 122 1
126 58 123 1
127 59 124 1
128 59 125 1
129 59 126 1
130 60 127 1
131 60 128 1
132 60 129 1
133 61 130 1
134 61 131 1
135 61 132 1
136 62 133 1
137 62 134 1
138 62 135 1
139 63 136 1
140 63 137 1
141 63 138 1
142 64 139 1
143 64 140 1
144 64 141 1
145 65 142 1
146 65 143 1
147 65 144 1