@COMMENT
LIGANDBOX_ID = PDB_VDN-01
SOURCE = PDBLigandExpo
MOLECULAR_FORMULA = C23H32N6O4S
MOLECULAR_WEIGHT = 488.612
MOLECULAR_CHARGE = 0
SUM_OF_ATOMNUMBER = 260
SUM_OF_ATOMNUMBER_MINUS_CHARGE = 260
NUM_OF_DONOR = 1
NUM_OF_ACCEPTOR = 6
NUM_OF_CHIRAL_ATOMS = 0
TPSA = 109.1300
HOMO = -10.7770
LUMO = -4.4059
mLOGD = 1.362
mLOGPA = -4.747
mLOGS = -2.556
@MOLECULE
PDB_VDN-01
67 70 0 0 0
SMALL
MOPAC_AM1BCC
@ATOM
1 C1 -4.7540 -3.4950 1.2510 C.3 1 LGD -0.1364
2 C2 -3.4000 -4.1050 0.8290 C.3 1 LGD 0.1486
3 O1 -2.3630 -3.1130 0.9850 O.3 1 LGD -0.3005
4 C3 -2.2170 -1.9740 0.2110 C.ar 1 LGD 0.2852
5 C4 -2.8780 -1.8730 -1.0340 C.ar 1 LGD -0.2352
6 C5 -2.7280 -0.7370 -1.8370 C.ar 1 LGD 0.0180
7 C6 -1.9180 0.3200 -1.4040 C.ar 1 LGD -0.3214
8 C7 -1.2440 0.2250 -0.1780 C.ar 1 LGD 0.0054
9 C8 -1.3700 -0.9140 0.6520 C.ar 1 LGD -0.1727
10 S1 -1.7030 1.7910 -2.4210 S.O2 1 LGD 1.2448
11 O2 -2.6710 1.7330 -3.5200 O.2 1 LGD -0.5544
12 O3 -1.5630 2.9480 -1.5300 O.2 1 LGD -0.5544
13 C9 4.0610 0.0690 -5.9700 C.3 1 LGD -0.1246
14 N1 -0.1330 1.5050 -3.1170 N.pl3 1 LGD -0.7891
15 C10 1.0750 1.9670 -2.4110 C.3 1 LGD 0.2135
16 C11 2.2560 2.2340 -3.3720 C.3 1 LGD 0.0914
17 N2 2.4440 1.1280 -4.3420 N.4 1 LGD -0.6595
18 C12 1.2170 0.8880 -5.1480 C.3 1 LGD 0.0914
19 C13 -0.0110 0.5820 -4.2570 C.3 1 LGD 0.2135
20 C14 3.6720 1.3200 -5.1500 C.3 1 LGD 0.1145
21 C15 -0.6180 -0.9420 1.9350 C.2 1 LGD 0.7728
22 N3 -0.7200 -1.9480 2.8240 N.2 1 LGD -0.7376
23 C16 -0.0760 -2.0890 4.0640 C.2 1 LGD 0.7891
24 C17 0.8140 -0.9730 4.3660 C.ar 1 LGD -0.3098
25 N4 0.9730 0.0590 3.4970 N.ar 1 LGD 0.0281
26 N5 0.2520 0.1150 2.2930 N.pl3 1 LGD -0.7790
27 O4 -0.2540 -3.0450 4.7990 O.2 1 LGD -0.4825
28 C18 1.6350 -0.6260 5.4010 C.ar 1 LGD 0.3796
29 N6 2.2730 0.5660 5.2010 N.ar 1 LGD -0.6343
30 C19 1.8590 0.9960 4.0190 C.ar 1 LGD 0.4102
31 C20 1.8090 -1.4640 6.6400 C.3 1 LGD -0.1252
32 C21 2.2810 2.2830 3.3570 C.3 1 LGD -0.0970
33 C22 1.1960 3.3780 3.4800 C.3 1 LGD -0.0855
34 C23 1.6080 4.6880 2.7750 C.3 1 LGD -0.0911
35 H1 -5.0470 -2.6710 0.5900 H 1 LGD 0.0549
36 H2 -5.5430 -4.2560 1.2130 H 1 LGD 0.0549
37 H3 -4.7010 -3.1120 2.2780 H 1 LGD 0.0549
38 H4 -3.1800 -4.9570 1.4830 H 1 LGD 0.0692
39 H5 -3.4400 -4.4780 -0.2020 H 1 LGD 0.0692
40 H6 -3.5080 -2.6760 -1.4010 H 1 LGD 0.1639
41 H7 -3.2410 -0.6840 -2.7920 H 1 LGD 0.1613
42 H8 -0.6160 1.0590 0.1210 H 1 LGD 0.1322
43 H9 3.3460 -0.1220 -6.7800 H 1 LGD 0.0760
44 H10 5.0480 0.2090 -6.4270 H 1 LGD 0.0760
45 H11 4.1080 -0.8190 -5.3270 H 1 LGD 0.0760
46 H12 0.8590 2.8870 -1.8540 H 1 LGD 0.0845
47 H13 1.3680 1.1920 -1.6910 H 1 LGD 0.0845
48 H14 2.0630 3.1680 -3.9150 H 1 LGD 0.1105
49 H15 3.1670 2.3760 -2.7770 H 1 LGD 0.1105
50 H16 0.9990 1.7760 -5.7550 H 1 LGD 0.1105
51 H17 1.3590 0.0420 -5.8300 H 1 LGD 0.1105
52 H18 0.0830 -0.4370 -3.8610 H 1 LGD 0.0845
53 H19 -0.9170 0.6240 -4.8730 H 1 LGD 0.0845
54 H20 4.5110 1.5530 -4.4810 H 1 LGD 0.1060
55 H21 3.5460 2.1740 -5.8290 H 1 LGD 0.1060
56 H22 0.3900 0.9280 1.7100 H 1 LGD 0.4572
57 H23 2.1960 -2.4600 6.3890 H 1 LGD 0.0591
58 H24 2.5130 -0.9980 7.3420 H 1 LGD 0.0591
59 H25 0.8530 -1.5940 7.1620 H 1 LGD 0.0591
60 H26 3.2150 2.6450 3.8060 H 1 LGD 0.0582
61 H27 2.4970 2.0990 2.2970 H 1 LGD 0.0582
62 H28 0.2550 3.0160 3.0460 H 1 LGD 0.0517
63 H29 1.0010 3.5820 4.5410 H 1 LGD 0.0517
64 H30 0.8250 5.4480 2.8880 H 1 LGD 0.0364
65 H31 2.5360 5.0870 3.2050 H 1 LGD 0.0364
66 H32 1.7680 4.5200 1.7020 H 1 LGD 0.0364
67 H33 2.3957 0.2560 -3.8549 H 1 LGD 0.4401
@BOND
1 1 2 1
2 2 3 1
3 3 4 1
4 4 5 ar
5 4 9 ar
6 5 6 ar
7 6 7 ar
8 7 8 ar
9 7 10 1
10 8 9 ar
11 9 21 1
12 10 11 2
13 10 12 2
14 10 14 1
15 13 20 1
16 14 15 1
17 14 19 1
18 15 16 1
19 16 17 1
20 17 18 1
21 17 20 1
22 18 19 1
23 21 22 2
24 21 26 1
25 22 23 1
26 23 24 1
27 23 27 2
28 24 25 1
29 24 28 2
30 25 26 1
31 25 30 1
32 28 29 1
33 28 31 1
34 29 30 2
35 30 32 1
36 32 33 1
37 33 34 1
38 1 35 1
39 1 36 1
40 1 37 1
41 2 38 1
42 2 39 1
43 5 40 1
44 6 41 1
45 8 42 1
46 13 43 1
47 13 44 1
48 13 45 1
49 15 46 1
50 15 47 1
51 16 48 1
52 16 49 1
53 18 50 1
54 18 51 1
55 19 52 1
56 19 53 1
57 20 54 1
58 20 55 1
59 26 56 1
60 31 57 1
61 31 58 1
62 31 59 1
63 32 60 1
64 32 61 1
65 33 62 1
66 33 63 1
67 34 64 1
68 34 65 1
69 34 66 1
70 17 67 1